Plicanthus hirtellus (plicanthus_hirtellus)
Imported from atlas release summary for Plicanthus hirtellus.
705
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
705
Candidate Genes
C4H
8.38%
C3'H/CYP98A
5.95%
CYP76
5.48%
4CL
5.34%
BAHD
4.63%
IFS
3.7%
POD
3.46%
F3H
3.14%
Other Families
59.93%
More Families (96)
STR
59
2.76%
BR6OX2/CYP85A2
59
2.76%
NMT
57
2.67%
T3O
46
2.15%
DWF4/CYP90B1
46
2.15%
H6H
45
2.11%
F3'H/CYP75B
43
2.01%
GS
38
1.78%
TRI/TRII
38
1.78%
IFR
34
1.59%
IO
32
1.5%
G8O/G8H
29
1.36%
UGT
29
1.36%
T16H
27
1.26%
PAL
27
1.26%
UFGT
26
1.22%
PYKS
25
1.17%
7DLGT
25
1.17%
CODM/T6ODM
23
1.08%
SMT1/SMT2/SMT3
23
1.08%
HCT
22
1.03%
CAD
21
0.98%
CHS
20
0.94%
CSE
19
0.89%
FNS
18
0.84%
BR6OX1/CYP85A1
18
0.84%
LAC
17
0.8%
CAS
16
0.75%
TPS
16
0.75%
CYP719
15
0.7%
F3'5'H/CYP75A
15
0.7%
RAS
15
0.7%
SGD
14
0.66%
COR
13
0.61%
NCS
13
0.61%
COMT
13
0.61%
CYP71
13
0.61%
CNMT
12
0.56%
ANR
12
0.56%
SLS
11
0.51%
8HGO
9
0.42%
F5H/CYP84A
9
0.42%
CPD/CYP90A1
9
0.42%
CYP90D1
9
0.42%
XMT_MXMT_DXMT
8
0.37%
PMT
8
0.37%
CYP80B1
7
0.33%
GES
7
0.33%
SMO1/SMO2
7
0.33%
ROT3/CYP90C1
7
0.33%
GGPPS
7
0.33%
7DLH
6
0.28%
MPO
6
0.28%
ISY
6
0.28%
CPR
6
0.28%
MVK
6
0.28%
AACT
6
0.28%
DXS
6
0.28%
FPPS
6
0.28%
LAMT
5
0.23%
CYP80F1
5
0.23%
HPPR
5
0.23%
DET2
5
0.23%
BBE
4
0.19%
DFR
4
0.19%
ANS/LDOX
4
0.19%
DWF1
4
0.19%
CYP51G1
4
0.19%
HYD1
4
0.19%
MVD
4
0.19%
MCT/IspD
4
0.19%
ADC
3
0.14%
16OMT
3
0.14%
CCR
3
0.14%
TAT
3
0.14%
SQS/FDFT1
3
0.14%
HDR/IspH
3
0.14%
IDI
3
0.14%
TDC
2
0.09%
6OMT_4OMT_SOMT
2
0.09%
CHI
2
0.09%
CCoAOMT
2
0.09%
FK
2
0.09%
DWF5
2
0.09%
SQE
2
0.09%
DXR
2
0.09%
HMGR
2
0.09%
MDS/IspF
2
0.09%
TYDC_DDC
1
0.05%
ODC
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
HDS/IspG
1
0.05%
HMGS
1
0.05%
CMK/IspE
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 173 | 20 | BAHD (67) | View species results |
| Phenylpropanoid pathway | 169 | 10 | POD (62) | View species results |
| Alkaloid pathway | 149 | 19 | TRI/TRII (23) | View species results |
| Flavonoid pathway | 94 | 9 | 4CL (21) | View species results |
| Rosmarinic acid pathway | 77 | 7 | C4H (32) | View species results |
| Steroid pathway | 43 | 12 | CAS (15) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 912 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 136 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Phir1080003710 | Alkaloid | GS | low | borderline |
| Phir1320008680 | Alkaloid | GS | low | borderline |
| Phir1381810011390 | Alkaloid | GS | low | borderline |
| Phir1402700014000 | Alkaloid | GS | high | pass |
| Phir1404780014230 | Alkaloid | GS | low | borderline |
| Phir1839240034200 | Alkaloid | GS | low | borderline |
| Phir1940039490 | Alkaloid | GS | medium | pass |
| Phir1950039680 | Alkaloid | GS | low | borderline |
| Phir2032430044110 | Alkaloid | GS | low | borderline |
| Phir2052360047020 | Alkaloid | GS | low | borderline |
| Phir2154820056550 | Alkaloid | GS | medium | pass |
| Phir2199290063640 | Alkaloid | GS | low | borderline |
| Phir2232830070700 | Alkaloid | GS | low | borderline |
| Phir2246950075800 | Alkaloid | GS | low | borderline |
| Phir2260750087380 | Alkaloid | GS | low | borderline |
| Phir2269510107840 | Alkaloid | GS | medium | pass |
| Phir2272720120080 | Alkaloid | GS | low | borderline |
| Phir2276550140380 | Alkaloid | GS | medium | pass |
| Phir2277780147120 | Alkaloid | GS | medium | pass |
| Phir2279060156590 | Alkaloid | GS | low | borderline |
| Phir2283380175420 | Alkaloid | GS | low | borderline |
| Phir2320182980 | Alkaloid | GS | high | pass |
| Phir2490189070 | Alkaloid | GS | low | borderline |
| Phir2510190180 | Alkaloid | GS | low | borderline |
| Phir2554390192990 | Alkaloid | GS | medium | pass |
| Phir2554400193000 | Alkaloid | GS | medium | pass |
| Phir2720194710 | Alkaloid | GS | low | borderline |
| Phir3080199890 | Alkaloid | GS | low | borderline |
| Phir3800209450 | Alkaloid | GS | low | borderline |
| Phir3800209490 | Alkaloid | GS | low | borderline |
| Phir4180216020 | Alkaloid | GS | low | borderline |
| Phir4250220340 | Alkaloid | GS | low | borderline |
| Phir4780229660 | Alkaloid | GS | low | borderline |
| Phir580248780 | Alkaloid | GS | low | borderline |
| Phir630258490 | Alkaloid | GS | low | borderline |
| Phir930281960 | Alkaloid | GS | low | borderline |
| Phir970283910 | Alkaloid | GS | medium | pass |
| Phir980284790 | Alkaloid | GS | low | borderline |