PlantSME Plant secondary metabolism enzyme database

Plicanthus hirtellus (plicanthus_hirtellus)

Imported from atlas release summary for Plicanthus hirtellus.

1085
Candidate Protein Records
705
Pathway-Level Records
2136
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 24.54% Phenylpropanoid pathway 23.97% Alkaloid pathway 21.13% Flavonoid pathway 13.33% Rosmarinic acid pathway 10.92% Steroid pathway 6.1%
Family Distribution
C4H 8.38% C3'H/CYP98A 5.95% CYP76 5.48% 4CL 5.34% BAHD 4.63% IFS 3.7% POD 3.46% F3H 3.14%
Other Families 59.93%
More Families (96)
STR 59 2.76% BR6OX2/CYP85A2 59 2.76% NMT 57 2.67% T3O 46 2.15% DWF4/CYP90B1 46 2.15% H6H 45 2.11% F3'H/CYP75B 43 2.01% GS 38 1.78% TRI/TRII 38 1.78% IFR 34 1.59% IO 32 1.5% G8O/G8H 29 1.36% UGT 29 1.36% T16H 27 1.26% PAL 27 1.26% UFGT 26 1.22% PYKS 25 1.17% 7DLGT 25 1.17% CODM/T6ODM 23 1.08% SMT1/SMT2/SMT3 23 1.08% HCT 22 1.03% CAD 21 0.98% CHS 20 0.94% CSE 19 0.89% FNS 18 0.84% BR6OX1/CYP85A1 18 0.84% LAC 17 0.8% CAS 16 0.75% TPS 16 0.75% CYP719 15 0.7% F3'5'H/CYP75A 15 0.7% RAS 15 0.7% SGD 14 0.66% COR 13 0.61% NCS 13 0.61% COMT 13 0.61% CYP71 13 0.61% CNMT 12 0.56% ANR 12 0.56% SLS 11 0.51% 8HGO 9 0.42% F5H/CYP84A 9 0.42% CPD/CYP90A1 9 0.42% CYP90D1 9 0.42% XMT_MXMT_DXMT 8 0.37% PMT 8 0.37% CYP80B1 7 0.33% GES 7 0.33% SMO1/SMO2 7 0.33% ROT3/CYP90C1 7 0.33% GGPPS 7 0.33% 7DLH 6 0.28% MPO 6 0.28% ISY 6 0.28% CPR 6 0.28% MVK 6 0.28% AACT 6 0.28% DXS 6 0.28% FPPS 6 0.28% LAMT 5 0.23% CYP80F1 5 0.23% HPPR 5 0.23% DET2 5 0.23% BBE 4 0.19% DFR 4 0.19% ANS/LDOX 4 0.19% DWF1 4 0.19% CYP51G1 4 0.19% HYD1 4 0.19% MVD 4 0.19% MCT/IspD 4 0.19% ADC 3 0.14% 16OMT 3 0.14% CCR 3 0.14% TAT 3 0.14% SQS/FDFT1 3 0.14% HDR/IspH 3 0.14% IDI 3 0.14% TDC 2 0.09% 6OMT_4OMT_SOMT 2 0.09% CHI 2 0.09% CCoAOMT 2 0.09% FK 2 0.09% DWF5 2 0.09% SQE 2 0.09% DXR 2 0.09% HMGR 2 0.09% MDS/IspF 2 0.09% TYDC_DDC 1 0.05% ODC 1 0.05% CPI1 1 0.05% DWF7 1 0.05% HDS/IspG 1 0.05% HMGS 1 0.05% CMK/IspE 1 0.05% PMK 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 173 20 BAHD (67) View species results
Phenylpropanoid pathway 169 10 POD (62) View species results
Alkaloid pathway 149 19 TRI/TRII (23) View species results
Flavonoid pathway 94 9 4CL (21) View species results
Rosmarinic acid pathway 77 7 C4H (32) View species results
Steroid pathway 43 12 CAS (15) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 912 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 136 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Phir1080003950 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Phir1310008310 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
Phir1430920017350 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Phir1470018550 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Phir1581010022910 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Phir1726110030420 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Phir1868540035830 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Phir2000041900 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Phir2108890052160 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Phir2160057160 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Phir2180060240 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Phir2221420068610 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Phir2245830074970 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Phir2262800091270 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Phir2265000095310 Alkaloid NMT medium borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
Phir2269620108180 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Phir2270350110120 Alkaloid NMT low borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
Phir2270630111480 Alkaloid NMT low borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
Phir2272210117520 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Phir2272700119950 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Phir2274560128170 Alkaloid NMT low borderline NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Phir2274760130160 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Phir2274820130310 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Phir2275420133350 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Phir2276310138660 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Phir2276390139050 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Phir2276420139310 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
Phir2277280144170 Alkaloid NMT low borderline NMT__00021__sp_O64827_SUVR5_ARATH
Phir2278100149140 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Phir2278540152130 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Phir2278550152820 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Phir2279090157220 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Phir2280760167070 Alkaloid NMT medium borderline NMT__00001__sp_A0A075D654_ANMT_RAUSE
Phir2280880167530 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Phir2280960167640 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Phir2281550169550 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Phir2283820176490 Alkaloid NMT medium borderline NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ
Phir2283890177540 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Phir2990198770 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Phir3150201160 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Phir3160201410 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Phir3240202870 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
Phir3280203710 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Phir3820209830 Alkaloid NMT low borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Phir4780229680 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Phir5000233320 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH
Phir560244830 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Phir5880251340 Alkaloid NMT low borderline NMT__00039__sp_Q84W92_ANM13_ARATH
Phir5990253760 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
Phir6000254300 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH