Plicanthus hirtellus (plicanthus_hirtellus)
Imported from atlas release summary for Plicanthus hirtellus.
705
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
705
Candidate Genes
C4H
8.38%
C3'H/CYP98A
5.95%
CYP76
5.48%
4CL
5.34%
BAHD
4.63%
IFS
3.7%
POD
3.46%
F3H
3.14%
Other Families
59.93%
More Families (96)
STR
59
2.76%
BR6OX2/CYP85A2
59
2.76%
NMT
57
2.67%
T3O
46
2.15%
DWF4/CYP90B1
46
2.15%
H6H
45
2.11%
F3'H/CYP75B
43
2.01%
GS
38
1.78%
TRI/TRII
38
1.78%
IFR
34
1.59%
IO
32
1.5%
G8O/G8H
29
1.36%
UGT
29
1.36%
T16H
27
1.26%
PAL
27
1.26%
UFGT
26
1.22%
PYKS
25
1.17%
7DLGT
25
1.17%
CODM/T6ODM
23
1.08%
SMT1/SMT2/SMT3
23
1.08%
HCT
22
1.03%
CAD
21
0.98%
CHS
20
0.94%
CSE
19
0.89%
FNS
18
0.84%
BR6OX1/CYP85A1
18
0.84%
LAC
17
0.8%
CAS
16
0.75%
TPS
16
0.75%
CYP719
15
0.7%
F3'5'H/CYP75A
15
0.7%
RAS
15
0.7%
SGD
14
0.66%
COR
13
0.61%
NCS
13
0.61%
COMT
13
0.61%
CYP71
13
0.61%
CNMT
12
0.56%
ANR
12
0.56%
SLS
11
0.51%
8HGO
9
0.42%
F5H/CYP84A
9
0.42%
CPD/CYP90A1
9
0.42%
CYP90D1
9
0.42%
XMT_MXMT_DXMT
8
0.37%
PMT
8
0.37%
CYP80B1
7
0.33%
GES
7
0.33%
SMO1/SMO2
7
0.33%
ROT3/CYP90C1
7
0.33%
GGPPS
7
0.33%
7DLH
6
0.28%
MPO
6
0.28%
ISY
6
0.28%
CPR
6
0.28%
MVK
6
0.28%
AACT
6
0.28%
DXS
6
0.28%
FPPS
6
0.28%
LAMT
5
0.23%
CYP80F1
5
0.23%
HPPR
5
0.23%
DET2
5
0.23%
BBE
4
0.19%
DFR
4
0.19%
ANS/LDOX
4
0.19%
DWF1
4
0.19%
CYP51G1
4
0.19%
HYD1
4
0.19%
MVD
4
0.19%
MCT/IspD
4
0.19%
ADC
3
0.14%
16OMT
3
0.14%
CCR
3
0.14%
TAT
3
0.14%
SQS/FDFT1
3
0.14%
HDR/IspH
3
0.14%
IDI
3
0.14%
TDC
2
0.09%
6OMT_4OMT_SOMT
2
0.09%
CHI
2
0.09%
CCoAOMT
2
0.09%
FK
2
0.09%
DWF5
2
0.09%
SQE
2
0.09%
DXR
2
0.09%
HMGR
2
0.09%
MDS/IspF
2
0.09%
TYDC_DDC
1
0.05%
ODC
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
HDS/IspG
1
0.05%
HMGS
1
0.05%
CMK/IspE
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 173 | 20 | BAHD (67) | View species results |
| Phenylpropanoid pathway | 169 | 10 | POD (62) | View species results |
| Alkaloid pathway | 149 | 19 | TRI/TRII (23) | View species results |
| Flavonoid pathway | 94 | 9 | 4CL (21) | View species results |
| Rosmarinic acid pathway | 77 | 7 | C4H (32) | View species results |
| Steroid pathway | 43 | 12 | CAS (15) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 912 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 136 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Phir1080003150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir1320008590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir1320008640 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir1396060012870 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir1550020460 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir1616340025200 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir1800032430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir1940039430 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Phir1988880040870 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2000041760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2200064310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2241330073430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2250980077890 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2252500078850 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2257510083150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2260260086570 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Phir2262100089800 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2262430090680 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2263240091790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2265840097170 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2270410110210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2270410110290 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2272560119350 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2275360132600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2275360132610 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2276320138700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2276420139390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2276420139410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2277560145770 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2279850162850 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2280164030 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2281430169270 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2283430175720 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2284330178760 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Phir2800195930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir2930197290 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir3520206100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir3960212030 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir4120215030 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir420218150 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir420218160 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir420219160 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir4390222450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir4390222460 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir550241370 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir550241380 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir5720247020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir5720247030 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Phir6000254310 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Phir620257220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |