Poa infirma (poa_infirma)
Imported from atlas release summary for Poa infirma.
1902
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1902
Candidate Genes
C3'H/CYP98A
6.66%
C4H
6.39%
BAHD
6.14%
UGT
4.56%
POD
4.54%
7DLGT
4.19%
UFGT
4.13%
T3O
3.78%
Other Families
59.61%
More Families (97)
CYP76
170
3.53%
IFS
169
3.51%
4CL
147
3.05%
BR6OX2/CYP85A2
122
2.53%
DWF4/CYP90B1
120
2.49%
F3'H/CYP75B
118
2.45%
F3H
98
2.03%
CYP71
94
1.95%
NMT
93
1.93%
STR
74
1.53%
SMT1/SMT2/SMT3
68
1.41%
PMT
60
1.24%
CODM/T6ODM
60
1.24%
RAS
59
1.22%
CAD
57
1.18%
HCT
56
1.16%
FNS
55
1.14%
SLS
51
1.06%
PYKS
50
1.04%
H6H
49
1.02%
CCR
44
0.91%
T16H
42
0.87%
CSE
42
0.87%
CAS
42
0.87%
G8O/G8H
41
0.85%
CYP90D1
41
0.85%
TRI/TRII
39
0.81%
SGD
36
0.75%
ANR
36
0.75%
IFR
34
0.71%
PAL
33
0.68%
TPS
33
0.68%
GES
32
0.66%
LAC
31
0.64%
BBE
29
0.6%
IO
28
0.58%
F3'5'H/CYP75A
28
0.58%
CYP51G1
28
0.58%
F5H/CYP84A
27
0.56%
COMT
26
0.54%
GS
25
0.52%
16OMT
23
0.48%
DFR
22
0.46%
CHS
21
0.44%
CPD/CYP90A1
20
0.41%
BR6OX1/CYP85A1
18
0.37%
COR
17
0.35%
NCS
15
0.31%
8HGO
15
0.31%
LAMT
14
0.29%
TAT
14
0.29%
TYDC_DDC
13
0.27%
7DLH
13
0.27%
CNMT
13
0.27%
CYP719
11
0.23%
ANS/LDOX
9
0.19%
GGPPS
9
0.19%
FPPS
9
0.19%
CCoAOMT
8
0.17%
CPR
8
0.17%
ISY
6
0.12%
HPPR
6
0.12%
AACT
6
0.12%
CYP80B1
5
0.1%
ADC
5
0.1%
MPO
5
0.1%
DET2
5
0.1%
SQS/FDFT1
5
0.1%
TDC
4
0.08%
CYP80F1
4
0.08%
HYD1
4
0.08%
IDI
4
0.08%
HMGR
4
0.08%
XMT_MXMT_DXMT
3
0.06%
ODC
3
0.06%
ROT3/CYP90C1
3
0.06%
DWF1
3
0.06%
SMO1/SMO2
3
0.06%
MVK
3
0.06%
DXS
3
0.06%
MCT/IspD
3
0.06%
MVD
3
0.06%
HMGS
3
0.06%
6OMT_4OMT_SOMT
2
0.04%
CHI
2
0.04%
DWF7
2
0.04%
SQE
2
0.04%
PMK
2
0.04%
CMK/IspE
2
0.04%
HDR/IspH
2
0.04%
MDS/IspF
2
0.04%
FLS
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 543 | 19 | BAHD (218) | View species results |
| Alkaloid pathway | 406 | 20 | 7DLGT (98) | View species results |
| Phenylpropanoid pathway | 399 | 11 | POD (205) | View species results |
| Flavonoid pathway | 284 | 14 | UFGT (188) | View species results |
| Rosmarinic acid pathway | 183 | 7 | C4H (88) | View species results |
| Steroid pathway | 87 | 13 | SMT1/SMT2/SMT3 (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1964 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 411 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| poa_infirma_ijg1193.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg13744.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg15041.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg16955.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg17050.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg24112.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg30786.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg31558.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg32251.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg32604.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg32866.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg33782.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg34500.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg34511.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg34518.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg35747.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg35917.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg38265.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg38548.t1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg39885.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg40154.t1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg4391.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg4394.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg4478.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg45323.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg45924.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg48272.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg488.t1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg49247.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg49785.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg49798.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg49920.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg49929.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg50130.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg50584.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg50585.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg53068.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg53841.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg54303.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg54497.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg55063.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg55067.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg55837.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg56230.t1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg5650.t1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| poa_infirma_ijg56778.t1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg5688.t1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg56955.t1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg58550.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| poa_infirma_ijg5878.t1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |