PlantSME Plant secondary metabolism enzyme database

Poa infirma (poa_infirma)

Imported from atlas release summary for Poa infirma.

1902
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.55% Alkaloid pathway 21.35% Phenylpropanoid pathway 20.98% Flavonoid pathway 14.93% Rosmarinic acid pathway 9.62% Steroid pathway 4.57%
Family Distribution
C3'H/CYP98A 6.66% C4H 6.39% BAHD 6.14% UGT 4.56% POD 4.54% 7DLGT 4.19% UFGT 4.13% T3O 3.78%
Other Families 59.61%
More Families (97)
CYP76 170 3.53% IFS 169 3.51% 4CL 147 3.05% BR6OX2/CYP85A2 122 2.53% DWF4/CYP90B1 120 2.49% F3'H/CYP75B 118 2.45% F3H 98 2.03% CYP71 94 1.95% NMT 93 1.93% STR 74 1.53% SMT1/SMT2/SMT3 68 1.41% PMT 60 1.24% CODM/T6ODM 60 1.24% RAS 59 1.22% CAD 57 1.18% HCT 56 1.16% FNS 55 1.14% SLS 51 1.06% PYKS 50 1.04% H6H 49 1.02% CCR 44 0.91% T16H 42 0.87% CSE 42 0.87% CAS 42 0.87% G8O/G8H 41 0.85% CYP90D1 41 0.85% TRI/TRII 39 0.81% SGD 36 0.75% ANR 36 0.75% IFR 34 0.71% PAL 33 0.68% TPS 33 0.68% GES 32 0.66% LAC 31 0.64% BBE 29 0.6% IO 28 0.58% F3'5'H/CYP75A 28 0.58% CYP51G1 28 0.58% F5H/CYP84A 27 0.56% COMT 26 0.54% GS 25 0.52% 16OMT 23 0.48% DFR 22 0.46% CHS 21 0.44% CPD/CYP90A1 20 0.41% BR6OX1/CYP85A1 18 0.37% COR 17 0.35% NCS 15 0.31% 8HGO 15 0.31% LAMT 14 0.29% TAT 14 0.29% TYDC_DDC 13 0.27% 7DLH 13 0.27% CNMT 13 0.27% CYP719 11 0.23% ANS/LDOX 9 0.19% GGPPS 9 0.19% FPPS 9 0.19% CCoAOMT 8 0.17% CPR 8 0.17% ISY 6 0.12% HPPR 6 0.12% AACT 6 0.12% CYP80B1 5 0.1% ADC 5 0.1% MPO 5 0.1% DET2 5 0.1% SQS/FDFT1 5 0.1% TDC 4 0.08% CYP80F1 4 0.08% HYD1 4 0.08% IDI 4 0.08% HMGR 4 0.08% XMT_MXMT_DXMT 3 0.06% ODC 3 0.06% ROT3/CYP90C1 3 0.06% DWF1 3 0.06% SMO1/SMO2 3 0.06% MVK 3 0.06% DXS 3 0.06% MCT/IspD 3 0.06% MVD 3 0.06% HMGS 3 0.06% 6OMT_4OMT_SOMT 2 0.04% CHI 2 0.04% DWF7 2 0.04% SQE 2 0.04% PMK 2 0.04% CMK/IspE 2 0.04% HDR/IspH 2 0.04% MDS/IspF 2 0.04% FLS 1 0.02% DWF5 1 0.02% CPI1 1 0.02% FK 1 0.02% HDS/IspG 1 0.02% DXR 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 543 19 BAHD (218) View species results
Alkaloid pathway 406 20 7DLGT (98) View species results
Phenylpropanoid pathway 399 11 POD (205) View species results
Flavonoid pathway 284 14 UFGT (188) View species results
Rosmarinic acid pathway 183 7 C4H (88) View species results
Steroid pathway 87 13 SMT1/SMT2/SMT3 (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1964 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status Best Target
poa_infirma_ijg13496.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
poa_infirma_ijg32889.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
poa_infirma_ijg33456.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
poa_infirma_ijg33458.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
poa_infirma_ijg33461.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
poa_infirma_ijg33969.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
poa_infirma_ijg50913.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
poa_infirma_ijg51862.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
poa_infirma_ijg57459.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
poa_infirma_ijg58213.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
poa_infirma_ijg63191.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
poa_infirma_ijg68481.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
poa_infirma_ijg7129.t1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ