Pogonatum microstomum (pogonatum_microstomum)
Imported from atlas release summary for Pogonatum microstomum.
602
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
602
Candidate Genes
C4H
8.33%
C3'H/CYP98A
6.94%
CYP76
5.9%
BAHD
4.92%
4CL
4.51%
POD
4.11%
NMT
3.64%
IFS
3.24%
Other Families
58.42%
More Families (95)
T3O
49
2.83%
PAL
48
2.78%
BR6OX2/CYP85A2
47
2.72%
F3'H/CYP75B
45
2.6%
DWF4/CYP90B1
43
2.49%
STR
42
2.43%
F3H
38
2.2%
IFR
31
1.79%
PYKS
28
1.62%
GS
28
1.62%
UGT
26
1.5%
T16H
25
1.45%
7DLGT
25
1.45%
UFGT
23
1.33%
CODM/T6ODM
22
1.27%
IO
20
1.16%
H6H
20
1.16%
G8O/G8H
19
1.1%
CYP71
19
1.1%
SGD
17
0.98%
CHS
17
0.98%
F3'5'H/CYP75A
16
0.93%
SMT1/SMT2/SMT3
16
0.93%
COMT
15
0.87%
LAC
15
0.87%
TRI/TRII
14
0.81%
CAS
13
0.75%
FNS
12
0.69%
CAD
12
0.69%
HCT
12
0.69%
BR6OX1/CYP85A1
12
0.69%
RAS
11
0.64%
CSE
10
0.58%
7DLH
9
0.52%
SLS
9
0.52%
DFR
9
0.52%
BBE
8
0.46%
CNMT
8
0.46%
CCR
8
0.46%
CPD/CYP90A1
8
0.46%
CYP80B1
7
0.4%
MPO
7
0.4%
ANR
7
0.4%
CPR
7
0.4%
CYP90D1
7
0.4%
AACT
7
0.4%
8HGO
6
0.35%
CYP719
6
0.35%
16OMT
5
0.29%
PMT
5
0.29%
F5H/CYP84A
5
0.29%
SQS/FDFT1
5
0.29%
ROT3/CYP90C1
5
0.29%
GGPPS
5
0.29%
COR
4
0.23%
TAT
4
0.23%
DET2
4
0.23%
DXS
4
0.23%
TDC
3
0.17%
NCS
3
0.17%
ANS/LDOX
3
0.17%
CHI
3
0.17%
CCoAOMT
3
0.17%
SMO1/SMO2
3
0.17%
LAMT
2
0.12%
ADC
2
0.12%
ODC
2
0.12%
ISY
2
0.12%
DWF1
2
0.12%
DWF5
2
0.12%
MVD
2
0.12%
HMGR
2
0.12%
HDS/IspG
2
0.12%
MVK
2
0.12%
IDI
2
0.12%
FPPS
2
0.12%
CYP80F1
1
0.06%
XMT_MXMT_DXMT
1
0.06%
TYDC_DDC
1
0.06%
FLS
1
0.06%
HPPR
1
0.06%
SQE
1
0.06%
CYP51G1
1
0.06%
HYD1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
HDR/IspH
1
0.06%
HMGS
1
0.06%
MDS/IspF
1
0.06%
MCT/IspD
1
0.06%
DXR
1
0.06%
PMK
1
0.06%
CMK/IspE
1
0.06%
TPS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 158 | 11 | POD (65) | View species results |
| Terpenoid pathway | 147 | 18 | BAHD (58) | View species results |
| Alkaloid pathway | 108 | 16 | PYKS (16) | View species results |
| Rosmarinic acid pathway | 82 | 7 | C4H (38) | View species results |
| Flavonoid pathway | 73 | 7 | UFGT (23) | View species results |
| Steroid pathway | 34 | 13 | CAS (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 775 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 108 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pmic1155300044140 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Pmic1157490054290 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Pmic1159320063260 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| Pmic1159460063900 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Pmic1160840074870 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Pmic1161390079550 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Pmic1161550080260 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Pmic1163530100180 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| Pmic1165550133520 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Pmic1166110143170 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Pmic1166830165840 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Pmic1168000200760 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Pmic691540222980 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Pmic851570234250 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |