Populus euphratica (populus_euphratica)
Imported from atlas release summary for Populus euphratica.
2051
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2051
Candidate Genes
BAHD
6.29%
UGT
5.38%
C4H
4.92%
7DLGT
4.81%
C3'H/CYP98A
4.61%
UFGT
4.28%
4CL
4.06%
POD
3.62%
Other Families
62.03%
More Families (98)
IFS
149
3.29%
CYP76
124
2.74%
F3H
123
2.71%
T3O
120
2.65%
NMT
114
2.51%
DWF4/CYP90B1
88
1.94%
STR
80
1.76%
CAD
74
1.63%
TPS
66
1.46%
H6H
64
1.41%
CODM/T6ODM
64
1.41%
GES
64
1.41%
TRI/TRII
62
1.37%
CAS
62
1.37%
BR6OX2/CYP85A2
62
1.37%
SMT1/SMT2/SMT3
62
1.37%
F3'H/CYP75B
59
1.3%
LAC
59
1.3%
HCT
59
1.3%
CSE
53
1.17%
CYP90D1
51
1.13%
IFR
47
1.04%
CYP71
46
1.01%
BBE
43
0.95%
COMT
41
0.9%
GS
38
0.84%
RAS
38
0.84%
PMT
37
0.82%
PYKS
35
0.77%
SGD
34
0.75%
G8O/G8H
33
0.73%
CCR
33
0.73%
TAT
33
0.73%
FNS
32
0.71%
16OMT
29
0.64%
IO
29
0.64%
T16H
29
0.64%
NCS
27
0.6%
F5H/CYP84A
27
0.6%
SLS
26
0.57%
ANR
26
0.57%
7DLH
24
0.53%
F3'5'H/CYP75A
24
0.53%
PAL
24
0.53%
CPD/CYP90A1
23
0.51%
8HGO
19
0.42%
DFR
18
0.4%
BR6OX1/CYP85A1
18
0.4%
LAMT
17
0.38%
ROT3/CYP90C1
17
0.38%
ANS/LDOX
15
0.33%
SQE
15
0.33%
AACT
13
0.29%
COR
12
0.26%
CNMT
12
0.26%
CHS
12
0.26%
CPR
11
0.24%
SQS/FDFT1
11
0.24%
DET2
11
0.24%
GGPPS
11
0.24%
MPO
10
0.22%
FPPS
10
0.22%
DXS
10
0.22%
ISY
8
0.18%
CYP719
8
0.18%
CYP80B1
8
0.18%
HMGR
8
0.18%
MVD
8
0.18%
CCoAOMT
7
0.15%
HPPR
7
0.15%
CYP51G1
7
0.15%
MVK
7
0.15%
SMO1/SMO2
5
0.11%
TYDC_DDC
4
0.09%
TDC
4
0.09%
CHI
4
0.09%
DXR
4
0.09%
CYP80F1
3
0.07%
ODC
3
0.07%
6OMT_4OMT_SOMT
3
0.07%
DWF7
3
0.07%
DWF5
3
0.07%
MCT/IspD
3
0.07%
MDS/IspF
3
0.07%
CMK/IspE
3
0.07%
HYD1
2
0.04%
DWF1
2
0.04%
PMK
2
0.04%
HMGS
2
0.04%
IDI
2
0.04%
HDS/IspG
2
0.04%
HDR/IspH
2
0.04%
ADC
1
0.02%
XMT_MXMT_DXMT
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 633 | 21 | UGT (226) | View species results |
| Alkaloid pathway | 486 | 23 | 7DLGT (101) | View species results |
| Phenylpropanoid pathway | 404 | 11 | POD (153) | View species results |
| Flavonoid pathway | 270 | 12 | UFGT (167) | View species results |
| Rosmarinic acid pathway | 135 | 7 | 4CL (45) | View species results |
| Steroid pathway | 123 | 13 | CAS (51) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1407 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 382 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| populus_euphratica_GWHPAAYU000921 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU006452 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU007114 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU008341 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU008350 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU008351 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU008352 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU008353 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU010381 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU011788 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU013237 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU021754 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU021755 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU028025 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU034068 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU034069 | Alkaloid | LAMT | medium | pass | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| populus_euphratica_GWHPAAYU035749 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |