PlantSME Plant secondary metabolism enzyme database

Populus glandulosa x p.alba (populus_glandulosa_x_p_alba)

Imported from atlas release summary for Populus glandulosa x p.alba.

4612
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1461 20 UGT (565) View species results
Alkaloid pathway 1073 23 7DLGT (262) View species results
Phenylpropanoid pathway 794 13 POD (308) View species results
Flavonoid pathway 637 14 UFGT (433) View species results
Rosmarinic acid pathway 388 7 C4H (145) View species results
Steroid pathway 259 13 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3905 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 818 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
PglaA12G0006860.1 Rosmarinic Acid C4H low borderline
PglaA12G0006900.1 Rosmarinic Acid C4H low borderline
PglaA13G0000100.1 Rosmarinic Acid C4H low borderline
PglaA13G0000330.1 Rosmarinic Acid C4H low borderline
PglaA13G0000360.1 Rosmarinic Acid C4H low borderline
PglaA13G0000370.1 Rosmarinic Acid C4H low borderline
PglaA13G0000380.1 Rosmarinic Acid C4H low borderline
PglaA13G0000390.1 Rosmarinic Acid C4H low borderline
PglaA13G0000400.1 Rosmarinic Acid C4H low borderline
PglaA13G0000410.1 Rosmarinic Acid C4H low borderline
PglaA13G0000420.1 Rosmarinic Acid C4H low borderline
PglaA13G0000430.1 Rosmarinic Acid C4H low borderline
PglaA13G0002910.1 Rosmarinic Acid C4H low borderline
PglaA13G0007330.1 Rosmarinic Acid C4H low borderline
PglaA13G0007340.1 Rosmarinic Acid C4H low borderline
PglaA13G0007760.1 Rosmarinic Acid C4H low borderline
PglaA13G0012520.1 Rosmarinic Acid C4H medium pass
PglaA14G0002360.1 Rosmarinic Acid C4H low borderline
PglaA14G0002550.1 Rosmarinic Acid C4H low borderline
PglaA14G0002580.1 Rosmarinic Acid C4H low borderline
PglaA14G0002580.2 Rosmarinic Acid C4H low borderline
PglaA14G0002600.1 Rosmarinic Acid C4H low borderline
PglaA14G0003320.1 Rosmarinic Acid C4H low borderline
PglaA14G0004870.1 Rosmarinic Acid C4H low borderline
PglaA14G0009340.1 Rosmarinic Acid C4H low borderline
PglaA14G0013040.1 Rosmarinic Acid C4H low borderline
PglaA14G0013040.2 Rosmarinic Acid C4H low borderline
PglaA14G0013060.1 Rosmarinic Acid C4H low borderline
PglaA14G0013070.1 Rosmarinic Acid C4H low borderline
PglaA14G0015750.1 Rosmarinic Acid C4H low borderline
PglaA14G0015760.1 Rosmarinic Acid C4H low borderline
PglaA14G0016230.1 Rosmarinic Acid C4H low borderline
PglaA14G0016240.1 Rosmarinic Acid C4H low borderline
PglaA14G0016250.1 Rosmarinic Acid C4H medium pass
PglaA14G0016260.1 Rosmarinic Acid C4H low borderline
PglaA14G0016270.1 Rosmarinic Acid C4H low borderline
PglaA14G0016300.1 Rosmarinic Acid C4H low borderline
PglaA14G0016310.1 Rosmarinic Acid C4H low borderline
PglaA14G0016330.1 Rosmarinic Acid C4H low borderline
PglaA14G0016360.1 Rosmarinic Acid C4H low borderline
PglaA14G0016380.1 Rosmarinic Acid C4H low borderline
PglaA14G0017160.1 Rosmarinic Acid C4H low borderline
PglaA14G0017830.1 Rosmarinic Acid C4H medium pass
PglaA14G0017840.1 Rosmarinic Acid C4H low borderline
PglaA14G0017850.1 Rosmarinic Acid C4H low borderline
PglaA14G0017860.1 Rosmarinic Acid C4H low borderline
PglaA14G0017870.1 Rosmarinic Acid C4H medium pass
PglaA14G0017910.1 Rosmarinic Acid C4H medium pass
PglaA14G0017920.1 Rosmarinic Acid C4H medium pass
PglaA14G0017920.2 Rosmarinic Acid C4H medium pass