Populus glandulosa x p.alba (populus_glandulosa_x_p_alba)
Imported from atlas release summary for Populus glandulosa x p.alba.
4612
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4612
Candidate Genes
C4H
6.07%
UGT
5.81%
BAHD
5.7%
C3'H/CYP98A
5.37%
7DLGT
4.72%
UFGT
4.38%
IFS
4.1%
CYP76
3.76%
Other Families
60.1%
More Families (97)
4CL
366
3.42%
T3O
365
3.41%
POD
328
3.06%
F3H
268
2.5%
NMT
232
2.17%
DWF4/CYP90B1
230
2.15%
CAD
177
1.65%
BR6OX2/CYP85A2
177
1.65%
STR
168
1.57%
F3'H/CYP75B
161
1.5%
H6H
152
1.42%
BBE
141
1.32%
CODM/T6ODM
136
1.27%
SGD
131
1.22%
CAS
128
1.19%
CYP71
128
1.19%
TRI/TRII
121
1.13%
LAC
120
1.12%
HCT
120
1.12%
SMT1/SMT2/SMT3
117
1.09%
IO
112
1.05%
CYP90D1
112
1.05%
TPS
101
0.94%
GES
98
0.91%
IFR
94
0.88%
PYKS
87
0.81%
RAS
87
0.81%
GS
80
0.75%
TAT
79
0.74%
CSE
78
0.73%
G8O/G8H
77
0.72%
COMT
74
0.69%
LAMT
67
0.63%
PMT
67
0.63%
CCR
66
0.62%
F5H/CYP84A
66
0.62%
FNS
64
0.6%
SLS
63
0.59%
16OMT
61
0.57%
ANR
61
0.57%
CPD/CYP90A1
58
0.54%
T16H
51
0.48%
BR6OX1/CYP85A1
47
0.44%
8HGO
45
0.42%
F3'5'H/CYP75A
45
0.42%
DFR
43
0.4%
NCS
42
0.39%
7DLH
40
0.37%
PAL
36
0.34%
ISY
34
0.32%
CNMT
32
0.3%
ROT3/CYP90C1
32
0.3%
SQE
32
0.3%
CHS
31
0.29%
CYP51G1
29
0.27%
DET2
28
0.26%
SQS/FDFT1
27
0.25%
ANS/LDOX
26
0.24%
COR
25
0.23%
CYP719
25
0.23%
AACT
24
0.22%
MPO
21
0.2%
CPR
21
0.2%
HPPR
20
0.19%
FPPS
20
0.19%
GGPPS
19
0.18%
HMGR
16
0.15%
CYP80B1
15
0.14%
CCoAOMT
15
0.14%
SMO1/SMO2
15
0.14%
DXS
15
0.14%
MVK
14
0.13%
MVD
13
0.12%
TYDC_DDC
11
0.1%
TDC
10
0.09%
MCT/IspD
8
0.07%
CMK/IspE
7
0.07%
ODC
6
0.06%
CHI
6
0.06%
DWF5
6
0.06%
HDS/IspG
6
0.06%
HDR/IspH
6
0.06%
CYP80F1
5
0.05%
XMT_MXMT_DXMT
5
0.05%
HYD1
5
0.05%
DWF7
5
0.05%
DXR
5
0.05%
IDI
5
0.05%
6OMT_4OMT_SOMT
4
0.04%
DWF1
4
0.04%
PMK
4
0.04%
HMGS
4
0.04%
MDS/IspF
4
0.04%
ADC
2
0.02%
FK
2
0.02%
CPI1
2
0.02%
FLS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1461 | 20 | UGT (565) | View species results |
| Alkaloid pathway | 1073 | 23 | 7DLGT (262) | View species results |
| Phenylpropanoid pathway | 794 | 13 | POD (308) | View species results |
| Flavonoid pathway | 637 | 14 | UFGT (433) | View species results |
| Rosmarinic acid pathway | 388 | 7 | C4H (145) | View species results |
| Steroid pathway | 259 | 13 | CAS (115) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3905 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 818 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| PglaA01G0004560.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA03G0013730.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA03G0013730.2 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA03G0013770.1 | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| PglaA03G0013780.1 | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| PglaA04G0020400.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA04G0020560.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA05G0007710.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA08G0000670.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA08G0000710.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA08G0001050.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA10G0005780.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA11G0001800.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA11G0004480.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA11G0013320.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA11G0013330.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA11G0013340.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA11G0013350.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA11G0013360.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA11G0013510.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA11G0013520.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA12G0008650.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA16G0012560.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaA18G0005660.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA18G0005660.2 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaA18G0005670.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG01G0004140.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG03G0014660.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG03G0014680.1 | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| PglaG04G0019920.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG04G0020060.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaG05G0007430.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG08G0003060.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaG09G0015330.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG10G0005800.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG11G0002120.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG11G0003650.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG11G0004660.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaG14G0009490.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG16G0009690.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| PglaG18G0005950.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| PglaG18G0005960.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |