Populus glandulosa x p.alba (populus_glandulosa_x_p_alba)
Imported from atlas release summary for Populus glandulosa x p.alba.
4612
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4612
Candidate Genes
C4H
6.07%
UGT
5.81%
BAHD
5.7%
C3'H/CYP98A
5.37%
7DLGT
4.72%
UFGT
4.38%
IFS
4.1%
CYP76
3.76%
Other Families
60.1%
More Families (97)
4CL
366
3.42%
T3O
365
3.41%
POD
328
3.06%
F3H
268
2.5%
NMT
232
2.17%
DWF4/CYP90B1
230
2.15%
CAD
177
1.65%
BR6OX2/CYP85A2
177
1.65%
STR
168
1.57%
F3'H/CYP75B
161
1.5%
H6H
152
1.42%
BBE
141
1.32%
CODM/T6ODM
136
1.27%
SGD
131
1.22%
CAS
128
1.19%
CYP71
128
1.19%
TRI/TRII
121
1.13%
LAC
120
1.12%
HCT
120
1.12%
SMT1/SMT2/SMT3
117
1.09%
IO
112
1.05%
CYP90D1
112
1.05%
TPS
101
0.94%
GES
98
0.91%
IFR
94
0.88%
PYKS
87
0.81%
RAS
87
0.81%
GS
80
0.75%
TAT
79
0.74%
CSE
78
0.73%
G8O/G8H
77
0.72%
COMT
74
0.69%
LAMT
67
0.63%
PMT
67
0.63%
CCR
66
0.62%
F5H/CYP84A
66
0.62%
FNS
64
0.6%
SLS
63
0.59%
16OMT
61
0.57%
ANR
61
0.57%
CPD/CYP90A1
58
0.54%
T16H
51
0.48%
BR6OX1/CYP85A1
47
0.44%
8HGO
45
0.42%
F3'5'H/CYP75A
45
0.42%
DFR
43
0.4%
NCS
42
0.39%
7DLH
40
0.37%
PAL
36
0.34%
ISY
34
0.32%
CNMT
32
0.3%
ROT3/CYP90C1
32
0.3%
SQE
32
0.3%
CHS
31
0.29%
CYP51G1
29
0.27%
DET2
28
0.26%
SQS/FDFT1
27
0.25%
ANS/LDOX
26
0.24%
COR
25
0.23%
CYP719
25
0.23%
AACT
24
0.22%
MPO
21
0.2%
CPR
21
0.2%
HPPR
20
0.19%
FPPS
20
0.19%
GGPPS
19
0.18%
HMGR
16
0.15%
CYP80B1
15
0.14%
CCoAOMT
15
0.14%
SMO1/SMO2
15
0.14%
DXS
15
0.14%
MVK
14
0.13%
MVD
13
0.12%
TYDC_DDC
11
0.1%
TDC
10
0.09%
MCT/IspD
8
0.07%
CMK/IspE
7
0.07%
ODC
6
0.06%
CHI
6
0.06%
DWF5
6
0.06%
HDS/IspG
6
0.06%
HDR/IspH
6
0.06%
CYP80F1
5
0.05%
XMT_MXMT_DXMT
5
0.05%
HYD1
5
0.05%
DWF7
5
0.05%
DXR
5
0.05%
IDI
5
0.05%
6OMT_4OMT_SOMT
4
0.04%
DWF1
4
0.04%
PMK
4
0.04%
HMGS
4
0.04%
MDS/IspF
4
0.04%
ADC
2
0.02%
FK
2
0.02%
CPI1
2
0.02%
FLS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1461 | 20 | UGT (565) | View species results |
| Alkaloid pathway | 1073 | 23 | 7DLGT (262) | View species results |
| Phenylpropanoid pathway | 794 | 13 | POD (308) | View species results |
| Flavonoid pathway | 637 | 14 | UFGT (433) | View species results |
| Rosmarinic acid pathway | 388 | 7 | C4H (145) | View species results |
| Steroid pathway | 259 | 13 | CAS (115) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3905 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 818 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| PglaA10G0010460.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA10G0010470.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA10G0010480.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA10G0012530.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA10G0014190.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA11G0004620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA11G0005670.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA13G0003520.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA13G0004120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA14G0012300.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA15G0010280.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| PglaA15G0010450.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA15G0011310.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA15G0013600.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA16G0010620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA16G0011430.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA16G0011450.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA16G0013440.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| PglaA16G0013460.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| PglaA17G0000010.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA17G0011000.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA17G0011030.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA17G0013370.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| PglaA18G0000060.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA18G0010610.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA18G0010630.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaA19G0003850.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0005680.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0006890.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0009220.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0014710.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0014750.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0020350.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0020370.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0020800.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0024490.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| PglaG01G0027320.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0027330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0028870.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0040270.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0041170.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0041190.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG01G0041190.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG02G0007050.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG02G0010330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG03G0004650.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG03G0005050.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG03G0005060.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG03G0006030.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| PglaG03G0017490.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |