PlantSME Plant secondary metabolism enzyme database

Populus glandulosa x p.alba (populus_glandulosa_x_p_alba)

Imported from atlas release summary for Populus glandulosa x p.alba.

4612
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1461 20 UGT (565) View species results
Alkaloid pathway 1073 23 7DLGT (262) View species results
Phenylpropanoid pathway 794 13 POD (308) View species results
Flavonoid pathway 637 14 UFGT (433) View species results
Rosmarinic acid pathway 388 7 C4H (145) View species results
Steroid pathway 259 13 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3905 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 818 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
PglaG12G0005230.1 Rosmarinic Acid 4CL medium pass
PglaG12G0005240.1 Rosmarinic Acid 4CL medium pass
PglaG13G0006620.1 Rosmarinic Acid 4CL medium pass
PglaG13G0006630.1 Rosmarinic Acid 4CL low borderline
PglaG13G0006650.1 Rosmarinic Acid 4CL medium pass
PglaG13G0014030.1 Rosmarinic Acid 4CL low borderline
PglaG13G0014030.2 Rosmarinic Acid 4CL low borderline
PglaG14G0003120.1 Rosmarinic Acid 4CL low borderline
PglaG14G0003120.2 Rosmarinic Acid 4CL low borderline
PglaG14G0005820.1 Rosmarinic Acid 4CL low borderline
PglaG15G0000220.1 Rosmarinic Acid 4CL medium pass
PglaG15G0006190.1 Rosmarinic Acid 4CL medium pass
PglaG16G0011350.1 Rosmarinic Acid 4CL medium pass
PglaG17G0002560.1 Rosmarinic Acid 4CL medium pass
PglaG17G0004850.1 Rosmarinic Acid 4CL medium pass
PglaG17G0010320.1 Rosmarinic Acid 4CL low borderline
PglaG17G0013180.1 Rosmarinic Acid 4CL medium pass
PglaG17G0013180.2 Rosmarinic Acid 4CL medium pass
PglaG18G0005200.1 Rosmarinic Acid 4CL medium pass
PglaG19G0005450.1 Rosmarinic Acid 4CL medium pass
PglaG19G0005460.1 Rosmarinic Acid 4CL medium pass
PglaG19G0007520.1 Rosmarinic Acid 4CL medium pass
PglaA01G0003390.1 Rosmarinic Acid C4H low borderline
PglaA01G0009140.1 Rosmarinic Acid C4H low borderline
PglaA01G0009170.1 Rosmarinic Acid C4H low borderline
PglaA01G0011370.1 Rosmarinic Acid C4H low borderline
PglaA01G0011980.1 Rosmarinic Acid C4H low borderline
PglaA01G0012540.1 Rosmarinic Acid C4H low borderline
PglaA01G0017980.1 Rosmarinic Acid C4H medium pass
PglaA01G0018220.1 Rosmarinic Acid C4H low borderline
PglaA01G0018360.1 Rosmarinic Acid C4H medium pass
PglaA01G0018370.1 Rosmarinic Acid C4H low borderline
PglaA01G0018420.1 Rosmarinic Acid C4H low borderline
PglaA01G0018420.2 Rosmarinic Acid C4H low borderline
PglaA01G0018430.1 Rosmarinic Acid C4H low borderline
PglaA01G0018440.1 Rosmarinic Acid C4H low borderline
PglaA01G0018450.1 Rosmarinic Acid C4H low borderline
PglaA01G0018460.1 Rosmarinic Acid C4H low borderline
PglaA01G0021100.1 Rosmarinic Acid C4H low borderline
PglaA01G0025100.1 Rosmarinic Acid C4H low borderline
PglaA01G0028480.1 Rosmarinic Acid C4H low borderline
PglaA01G0028490.1 Rosmarinic Acid C4H low borderline
PglaA01G0028490.2 Rosmarinic Acid C4H low borderline
PglaA01G0033420.1 Rosmarinic Acid C4H low borderline
PglaA01G0033430.1 Rosmarinic Acid C4H low borderline
PglaA01G0033890.1 Rosmarinic Acid C4H medium pass
PglaA01G0033890.2 Rosmarinic Acid C4H medium pass
PglaA01G0034380.1 Rosmarinic Acid C4H medium pass
PglaA01G0036940.1 Rosmarinic Acid C4H low borderline
PglaA01G0039490.1 Rosmarinic Acid C4H low borderline