PlantSME Plant secondary metabolism enzyme database

Populus pruinosa (populus_pruinosa)

Imported from atlas release summary for Populus pruinosa.

1878
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 547 20 UGT (214) View species results
Alkaloid pathway 425 23 7DLGT (99) View species results
Phenylpropanoid pathway 353 11 POD (138) View species results
Flavonoid pathway 275 10 UFGT (186) View species results
Rosmarinic acid pathway 170 7 C4H (68) View species results
Steroid pathway 108 14 CAS (39) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1730 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 342 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
Ppruscaffold7790318920 Flavonoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold8060329840 Flavonoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Ppruscaffold8210331180 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold82820331720 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Ppruscaffold9000338720 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Ppruscaffold9130342990 Flavonoid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Ppruscaffold9130343000 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Ppruscaffold10430004360 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold10430004710 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold10430004720 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold11450009880 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Ppruscaffold126840018260 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Ppruscaffold13290020030 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold1390730040560 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Ppruscaffold1390820041930 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Ppruscaffold1391070046830 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Ppruscaffold1391070048060 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Ppruscaffold14380056460 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Ppruscaffold15740071870 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold15740071880 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold16140078670 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Ppruscaffold172240084740 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold17350085060 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold17350085070 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold20130106180 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold20130106200 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold20370112530 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Ppruscaffold20370112540 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Ppruscaffold220117860 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold220118100 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Ppruscaffold2410138040 Phenylpropanoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold24570144200 Phenylpropanoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
Ppruscaffold250149480 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Ppruscaffold29370164820 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Ppruscaffold30190166980 Phenylpropanoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Ppruscaffold33880181900 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Ppruscaffold33880182100 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold3800192950 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Ppruscaffold4110200430 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold41940201500 Phenylpropanoid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Ppruscaffold4220207690 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Ppruscaffold43820216280 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Ppruscaffold52320232310 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Ppruscaffold5720246400 Phenylpropanoid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
Ppruscaffold5720247850 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Ppruscaffold59860256490 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Ppruscaffold6090257930 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Ppruscaffold6090257940 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Ppruscaffold6090257950 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Ppruscaffold64290266300 Phenylpropanoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH