Populus pruinosa (populus_pruinosa)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.13% Alkaloid pathway 22.63% Phenylpropanoid pathway 18.8% Flavonoid pathway 14.64% Rosmarinic acid pathway 9.05% Steroid pathway 5.75%

Family Distribution

1878 Candidate Genes

C3'H/CYP98A 5.89% C4H 5.78% BAHD 5.48% UGT 5.14% 7DLGT 4.69% UFGT 4.47% IFS 4.19% CYP76 3.81%

Other Families 60.55%

More Families (98)

T3O 176 3.78% 4CL 172 3.7% POD 159 3.42% F3H 119 2.56% DWF4/CYP90B1 112 2.41% NMT 103 2.21% STR 81 1.74% F3'H/CYP75B 78 1.68% BR6OX2/CYP85A2 75 1.61% CODM/T6ODM 66 1.42% CAD 66 1.42% H6H 63 1.35% TRI/TRII 60 1.29% BBE 59 1.27% LAC 59 1.27% HCT 55 1.18% SMT1/SMT2/SMT3 53 1.14% CYP90D1 52 1.12% CYP71 50 1.08% CAS 47 1.01% IFR 45 0.97% CSE 43 0.92% IO 41 0.88% T16H 37 0.8% TAT 37 0.8% GES 36 0.77% PYKS 36 0.77% GS 34 0.73% TPS 34 0.73% CPD/CYP90A1 33 0.71% COMT 32 0.69% RAS 32 0.69% CCR 31 0.67% PMT 29 0.62% SGD 29 0.62% ANR 26 0.56% F5H/CYP84A 25 0.54% DFR 23 0.49% LAMT 22 0.47% SLS 22 0.47% NCS 22 0.47% FNS 22 0.47% G8O/G8H 21 0.45% F3'5'H/CYP75A 21 0.45% 16OMT 19 0.41% 7DLH 18 0.39% PAL 18 0.39% BR6OX1/CYP85A1 17 0.37% 8HGO 16 0.34% SQE 14 0.3% ISY 13 0.28% CHS 13 0.28% ANS/LDOX 13 0.28% SQS/FDFT1 13 0.28% FPPS 13 0.28% COR 11 0.24% CNMT 11 0.24% ROT3/CYP90C1 11 0.24% CYP51G1 11 0.24% DET2 11 0.24% MPO 10 0.22% CYP719 9 0.19% AACT 9 0.19% DXS 9 0.19% HPPR 8 0.17% SMO1/SMO2 8 0.17% GGPPS 8 0.17% CCoAOMT 7 0.15% CPR 7 0.15% HMGR 7 0.15% 6OMT_4OMT_SOMT 6 0.13% MVD 6 0.13% MVK 6 0.13% CYP80B1 4 0.09% TDC 4 0.09% ODC 3 0.06% CHI 3 0.06% DWF5 3 0.06% DXR 3 0.06% MCT/IspD 3 0.06% CMK/IspE 3 0.06% TYDC_DDC 2 0.04% CYP80F1 2 0.04% FLS 2 0.04% DWF7 2 0.04% DWF1 2 0.04% HYD1 2 0.04% IDI 2 0.04% MDS/IspF 2 0.04% GPPS 2 0.04% HDS/IspG 2 0.04% PMK 2 0.04% HDR/IspH 2 0.04% HMGS 2 0.04% XMT_MXMT_DXMT 1 0.02% ADC 1 0.02% FK 1 0.02% CPI1 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	547	20	UGT (214)	View species results
Alkaloid pathway	425	23	7DLGT (99)	View species results
Phenylpropanoid pathway	353	11	POD (138)	View species results
Flavonoid pathway	275	10	UFGT (186)	View species results
Rosmarinic acid pathway	170	7	C4H (68)	View species results
Steroid pathway	108	14	CAS (39)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1730	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	342	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NCS

Gene	Pathway	Family	Confidence	Status	Best Target
Ppruscaffold1390150034880	Alkaloid	NCS	low	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold16140076110	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold16140076120	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold17480087000	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold17480087010	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold17480087020	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold17480087030	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold17480087040	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold17480087050	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold17480087060	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold24360141340	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold30140166740	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold31380171300	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold358900187720	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold3800192260	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold48280227700	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold7060293860	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold7060294770	Alkaloid	NCS	medium	pass	NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Ppruscaffold7060294800	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold75960308730	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Ppruscaffold84790335000	Alkaloid	NCS	medium	borderline	NCS__00001__sp_A2A1A0_NCS1_COPJA
Ppruscaffold9150343960	Alkaloid	NCS	low	borderline	NCS__00003__sp_Q4QTJ1_NCS2_PAPSO