Populus pruinosa (populus_pruinosa)
Imported from atlas release summary for Populus pruinosa.
2218
Candidate Protein Records
1878
Pathway-Level Records
4651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4651
Family-Level Calls
C3'H/CYP98A
5.89%
C4H
5.78%
BAHD
5.48%
UGT
5.14%
7DLGT
4.69%
UFGT
4.47%
IFS
4.19%
CYP76
3.81%
Other Families
60.55%
More Families (98)
T3O
176
3.78%
4CL
172
3.7%
POD
159
3.42%
F3H
119
2.56%
DWF4/CYP90B1
112
2.41%
NMT
103
2.21%
STR
81
1.74%
F3'H/CYP75B
78
1.68%
BR6OX2/CYP85A2
75
1.61%
CODM/T6ODM
66
1.42%
CAD
66
1.42%
H6H
63
1.35%
TRI/TRII
60
1.29%
BBE
59
1.27%
LAC
59
1.27%
HCT
55
1.18%
SMT1/SMT2/SMT3
53
1.14%
CYP90D1
52
1.12%
CYP71
50
1.08%
CAS
47
1.01%
IFR
45
0.97%
CSE
43
0.92%
IO
41
0.88%
T16H
37
0.8%
TAT
37
0.8%
GES
36
0.77%
PYKS
36
0.77%
GS
34
0.73%
TPS
34
0.73%
CPD/CYP90A1
33
0.71%
COMT
32
0.69%
RAS
32
0.69%
CCR
31
0.67%
PMT
29
0.62%
SGD
29
0.62%
ANR
26
0.56%
F5H/CYP84A
25
0.54%
DFR
23
0.49%
LAMT
22
0.47%
SLS
22
0.47%
NCS
22
0.47%
FNS
22
0.47%
G8O/G8H
21
0.45%
F3'5'H/CYP75A
21
0.45%
16OMT
19
0.41%
7DLH
18
0.39%
PAL
18
0.39%
BR6OX1/CYP85A1
17
0.37%
8HGO
16
0.34%
SQE
14
0.3%
ISY
13
0.28%
CHS
13
0.28%
ANS/LDOX
13
0.28%
SQS/FDFT1
13
0.28%
FPPS
13
0.28%
COR
11
0.24%
CNMT
11
0.24%
ROT3/CYP90C1
11
0.24%
CYP51G1
11
0.24%
DET2
11
0.24%
MPO
10
0.22%
CYP719
9
0.19%
AACT
9
0.19%
DXS
9
0.19%
HPPR
8
0.17%
SMO1/SMO2
8
0.17%
GGPPS
8
0.17%
CCoAOMT
7
0.15%
CPR
7
0.15%
HMGR
7
0.15%
6OMT_4OMT_SOMT
6
0.13%
MVD
6
0.13%
MVK
6
0.13%
CYP80B1
4
0.09%
TDC
4
0.09%
ODC
3
0.06%
CHI
3
0.06%
DWF5
3
0.06%
DXR
3
0.06%
MCT/IspD
3
0.06%
CMK/IspE
3
0.06%
TYDC_DDC
2
0.04%
CYP80F1
2
0.04%
FLS
2
0.04%
DWF7
2
0.04%
DWF1
2
0.04%
HYD1
2
0.04%
IDI
2
0.04%
MDS/IspF
2
0.04%
GPPS
2
0.04%
HDS/IspG
2
0.04%
PMK
2
0.04%
HDR/IspH
2
0.04%
HMGS
2
0.04%
XMT_MXMT_DXMT
1
0.02%
ADC
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 547 | 20 | UGT (214) | View species results |
| Alkaloid pathway | 425 | 23 | 7DLGT (99) | View species results |
| Phenylpropanoid pathway | 353 | 11 | POD (138) | View species results |
| Flavonoid pathway | 275 | 10 | UFGT (186) | View species results |
| Rosmarinic acid pathway | 170 | 7 | C4H (68) | View species results |
| Steroid pathway | 108 | 14 | CAS (39) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1730 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 342 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ppruscaffold217280115390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold22190122110 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold2240122910 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold22640127590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold22640130620 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold23360134670 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold23360134680 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold23360134690 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold24050136120 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold2410137200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold2410139090 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold2410139110 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold2440141710 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold24570143920 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold24570144800 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold24570145170 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold24750147420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold28490161320 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold28900162400 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold28900162410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold3050168550 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold33400178060 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold36780189600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold395010197920 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold4220213230 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold47310223670 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold48070227070 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold50228760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold53550234310 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold5720246060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold5720247020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold5720247040 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold580252480 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold62110260410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold62300261210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold6530267540 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold6530267550 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold6530268010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold6640269860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold6680276720 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold6740283110 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold680285560 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold680286370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold7710311660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold7710312430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold7730314290 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold7790318090 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold7790319100 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ppruscaffold9100341800 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ppruscaffold91410343530 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |