PlantSME Plant secondary metabolism enzyme database

Populus trichocarpa (populus_trichocarpa)

Imported from atlas release summary for Populus trichocarpa.

3008
Candidate Protein Records
2612
Pathway-Level Records
6120
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 743 19 BAHD (276) View species results
Alkaloid pathway 615 20 7DLGT (125) View species results
Phenylpropanoid pathway 524 11 POD (217) View species results
Flavonoid pathway 344 10 UFGT (232) View species results
Rosmarinic acid pathway 213 7 C4H (81) View species results
Steroid pathway 173 13 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2251 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 456 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Potri.003G043900.3.p Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Potri.003G043900.4.p Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Potri.003G043900.5.p Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Potri.003G057001.1.p Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Potri.003G057100.1.p Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Potri.003G057200.1.p Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Potri.003G063100.1.p Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Potri.003G082100.2.p Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
Potri.003G115600.1.p Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Potri.003G115600.2.p Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Potri.003G121700.1.p Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Potri.003G160600.1.p Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Potri.003G164000.2.p Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.003G183900.2.p Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Potri.003G183900.3.p Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Potri.004G017600.1.p Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Potri.004G037800.1.p Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.004G053500.1.p Terpenoid BAHD medium pass BAHD__00028__sp_O80467_SDT_ARATH
Potri.004G093800.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G096066.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G096132.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G096200.2.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G096300.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G096425.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G103100.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G103200.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G103300.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G109300.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G109800.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G110400.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G110640.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G110700.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G120100.2.p Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Potri.004G120700.1.p Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Potri.004G183300.1.p Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Potri.004G190100.1.p Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Potri.004G215400.1.p Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.005G025400.1.p Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Potri.005G028000.1.p Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Potri.005G028100.1.p Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Potri.005G028200.1.p Terpenoid BAHD low borderline BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Potri.005G041000.7.p Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Potri.005G041000.8.p Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Potri.005G060100.1.p Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Potri.005G091700.1.p Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.005G091800.1.p Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Potri.005G104700.1.p Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Potri.005G104800.1.p Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Potri.005G121000.1.p Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
Potri.005G153600.1.p Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA