PlantSME Plant secondary metabolism enzyme database

Populus trichocarpa (populus_trichocarpa)

Imported from atlas release summary for Populus trichocarpa.

3008
Candidate Protein Records
2612
Pathway-Level Records
6120
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 743 19 BAHD (276) View species results
Alkaloid pathway 615 20 7DLGT (125) View species results
Phenylpropanoid pathway 524 11 POD (217) View species results
Flavonoid pathway 344 10 UFGT (232) View species results
Rosmarinic acid pathway 213 7 C4H (81) View species results
Steroid pathway 173 13 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2251 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 456 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Potri.004G132500.14.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.2.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.3.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.4.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.5.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.6.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.7.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.8.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.004G132500.9.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.005G048066.1.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048066.2.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048132.1.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048200.10.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048200.11.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048200.12.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048400.1.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048700.1.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G048700.5.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.005G210300.2.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.006G079200.1.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.006G079200.3.p Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Potri.006G079300.1.p Steroid CAS medium pass CAS__00006__sp_Q2XPU6_CAS1_RICCO
Potri.006G079300.2.p Steroid CAS medium pass CAS__00006__sp_Q2XPU6_CAS1_RICCO
Potri.007G002100.3.p Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
Potri.007G002100.4.p Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
Potri.007G002200.1.p Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
Potri.007G002200.3.p Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
Potri.007G002500.3.p Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
Potri.007G002500.5.p Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
Potri.007G074400.1.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.007G074466.1.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.007G118600.1.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.007G119700.3.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.007G119700.4.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.008G082400.1.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.008G082700.1.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.008G082700.2.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.008G153300.3.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.008G153300.4.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.009G064950.1.p Steroid CAS medium pass CAS__00013__sp_Q9SLP9_CAS1_LUFAE
Potri.011G031800.2.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.011G032300.2.p Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.011G085000.1.p Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
Potri.011G130666.1.p Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.011G142800.1.p Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Potri.013G035200.2.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.013G035500.1.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.013G035500.2.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.013G035500.6.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Potri.013G127800.1.p Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL