Populus wilsonii (populus_wilsonii)
Imported from atlas release summary for Populus wilsonii.
2104
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2104
Candidate Genes
BAHD
5.91%
C3'H/CYP98A
5.89%
C4H
5.71%
UGT
4.77%
7DLGT
4.54%
UFGT
4.38%
IFS
3.81%
T3O
3.52%
Other Families
61.46%
More Families (94)
CYP76
172
3.52%
4CL
171
3.5%
POD
164
3.36%
F3H
130
2.66%
DWF4/CYP90B1
126
2.58%
NMT
92
1.88%
F3'H/CYP75B
87
1.78%
STR
81
1.66%
CAD
72
1.47%
H6H
69
1.41%
BR6OX2/CYP85A2
69
1.41%
CYP71
69
1.41%
LAC
67
1.37%
BBE
65
1.33%
CODM/T6ODM
62
1.27%
CAS
61
1.25%
HCT
59
1.21%
SMT1/SMT2/SMT3
59
1.21%
TRI/TRII
58
1.19%
CYP90D1
58
1.19%
CSE
54
1.11%
SGD
50
1.02%
GES
48
0.98%
IFR
48
0.98%
TPS
47
0.96%
TAT
41
0.84%
PYKS
39
0.8%
IO
39
0.8%
COMT
39
0.8%
GS
37
0.76%
RAS
36
0.74%
PMT
32
0.65%
16OMT
32
0.65%
CCR
32
0.65%
ANR
31
0.63%
T16H
30
0.61%
G8O/G8H
29
0.59%
FNS
29
0.59%
NCS
25
0.51%
SLS
25
0.51%
F3'5'H/CYP75A
25
0.51%
7DLH
23
0.47%
F5H/CYP84A
23
0.47%
CPD/CYP90A1
21
0.43%
LAMT
18
0.37%
BR6OX1/CYP85A1
18
0.37%
8HGO
17
0.35%
CYP51G1
17
0.35%
DET2
17
0.35%
DFR
16
0.33%
PAL
15
0.31%
CNMT
14
0.29%
SQE
14
0.29%
ISY
13
0.27%
CHS
13
0.27%
COR
12
0.25%
ANS/LDOX
12
0.25%
ROT3/CYP90C1
12
0.25%
GGPPS
12
0.25%
CPR
11
0.23%
CYP719
10
0.2%
SQS/FDFT1
10
0.2%
AACT
10
0.2%
MPO
9
0.18%
FPPS
8
0.16%
CCoAOMT
7
0.14%
HPPR
7
0.14%
DXS
7
0.14%
HMGR
6
0.12%
MVK
6
0.12%
MVD
6
0.12%
TYDC_DDC
5
0.1%
SMO1/SMO2
5
0.1%
MCT/IspD
5
0.1%
CMK/IspE
4
0.08%
ODC
3
0.06%
TDC
3
0.06%
CHI
3
0.06%
DWF1
3
0.06%
DWF5
3
0.06%
HMGS
3
0.06%
CYP80B1
2
0.04%
CYP80F1
2
0.04%
HYD1
2
0.04%
DWF7
2
0.04%
MDS/IspF
2
0.04%
PMK
2
0.04%
HDR/IspH
2
0.04%
HDS/IspG
2
0.04%
DXR
2
0.04%
IDI
2
0.04%
ADC
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 624 | 20 | BAHD (224) | View species results |
| Alkaloid pathway | 477 | 18 | 7DLGT (115) | View species results |
| Phenylpropanoid pathway | 414 | 11 | POD (159) | View species results |
| Flavonoid pathway | 294 | 10 | UFGT (199) | View species results |
| Rosmarinic acid pathway | 172 | 7 | C4H (59) | View species results |
| Steroid pathway | 123 | 13 | CAS (55) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1782 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 384 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| populus_wilsonii_Pwi01G011660.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO |
| populus_wilsonii_Pwi01G015140.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi01G024330.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi01G024340.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi01G029630.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi01G032760.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi01G032790.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi01G032820.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi01G032850.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi02G010970.1 | Alkaloid | G8O/G8H | low | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi03G000450.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi03G006720.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO |
| populus_wilsonii_Pwi03G006740.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO |
| populus_wilsonii_Pwi03G010120.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU |
| populus_wilsonii_Pwi05G006900.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi07G004650.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO |
| populus_wilsonii_Pwi07G008030.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO |
| populus_wilsonii_Pwi08G008640.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi09G013210.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU |
| populus_wilsonii_Pwi10G013150.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU |
| populus_wilsonii_Pwi10G019490.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi12G006330.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi12G006340.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi13G006970.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi13G006980.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi14G016150.1 | Alkaloid | G8O/G8H | low | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi14G016190.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| populus_wilsonii_Pwi15G001070.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |
| populus_wilsonii_Pwi16G000870.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN |