Prunus fruticosa (prunus_fruticosa)
Imported from atlas release summary for Prunus fruticosa.
4671
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4671
Candidate Genes
C4H
6.32%
C3'H/CYP98A
6.13%
BAHD
4.76%
IFS
4.5%
T3O
3.78%
UGT
3.75%
4CL
3.55%
CYP76
3.48%
Other Families
63.73%
More Families (98)
POD
402
3.47%
UFGT
379
3.27%
STR
375
3.24%
F3H
370
3.19%
7DLGT
369
3.18%
DWF4/CYP90B1
282
2.43%
CAD
274
2.36%
SGD
262
2.26%
CODM/T6ODM
214
1.85%
LAC
204
1.76%
H6H
194
1.67%
BR6OX2/CYP85A2
193
1.67%
F3'H/CYP75B
192
1.66%
SMT1/SMT2/SMT3
182
1.57%
NMT
181
1.56%
CAS
181
1.56%
COMT
147
1.27%
7DLH
139
1.2%
GS
138
1.19%
ANR
135
1.16%
CYP90D1
116
1.0%
TRI/TRII
104
0.9%
GES
97
0.84%
IFR
97
0.84%
TPS
96
0.83%
HCT
95
0.82%
CYP71
95
0.82%
CSE
94
0.81%
16OMT
91
0.79%
BR6OX1/CYP85A1
90
0.78%
CCR
89
0.77%
TAT
86
0.74%
RAS
72
0.62%
LAMT
71
0.61%
T16H
70
0.6%
BBE
69
0.6%
NCS
67
0.58%
IO
65
0.56%
8HGO
64
0.55%
PMT
63
0.54%
SLS
63
0.54%
F3'5'H/CYP75A
57
0.49%
ROT3/CYP90C1
49
0.42%
PYKS
47
0.41%
DFR
47
0.41%
G8O/G8H
42
0.36%
F5H/CYP84A
40
0.35%
COR
36
0.31%
FNS
34
0.29%
CPD/CYP90A1
32
0.28%
ANS/LDOX
30
0.26%
CCoAOMT
28
0.24%
HPPR
25
0.22%
AACT
22
0.19%
CYP51G1
21
0.18%
ISY
19
0.16%
MVD
17
0.15%
SQE
16
0.14%
CNMT
15
0.13%
PAL
15
0.13%
DXS
14
0.12%
MPO
13
0.11%
TYDC_DDC
13
0.11%
CYP80B1
12
0.1%
FPPS
12
0.1%
SQS/FDFT1
11
0.09%
DWF7
11
0.09%
CYP719
10
0.09%
CPR
10
0.09%
HMGR
10
0.09%
TDC
8
0.07%
CHS
8
0.07%
6OMT_4OMT_SOMT
7
0.06%
XMT_MXMT_DXMT
7
0.06%
MDS/IspF
7
0.06%
GGPPS
7
0.06%
FLS
6
0.05%
CHI
6
0.05%
DET2
6
0.05%
DWF5
6
0.05%
SMO1/SMO2
6
0.05%
HDR/IspH
5
0.04%
MCT/IspD
4
0.03%
MVK
4
0.03%
DWF1
3
0.03%
HDS/IspG
3
0.03%
ODC
2
0.02%
CPI1
2
0.02%
FK
2
0.02%
DXR
2
0.02%
IDI
2
0.02%
HMGS
2
0.02%
PMK
2
0.02%
ADC
1
0.01%
CYP80F1
1
0.01%
HYD1
1
0.01%
CMK/IspE
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1157 | 19 | BAHD (450) | View species results |
| Alkaloid pathway | 1104 | 25 | SGD (256) | View species results |
| Phenylpropanoid pathway | 1075 | 12 | POD (393) | View species results |
| Flavonoid pathway | 548 | 12 | UFGT (345) | View species results |
| Rosmarinic acid pathway | 452 | 7 | C4H (209) | View species results |
| Steroid pathway | 335 | 13 | CAS (162) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4375 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 719 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| prunus_fruticosa_Mdom_HF29160-RA_R3 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Mdom_HF29160-RA_R4 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Mdom_HF29160-RA_R5 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Mdom_HF33980-RA_R6 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Mdom_HF34409-RA_R1 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Mdom_HF40221-RA_R4 | Alkaloid | 7DLGT | high | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS10204_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS1509_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS16029_R2 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS17177_R6 | Alkaloid | 7DLGT | high | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS22024_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS22024_R6 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS22328_R1 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS23651_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS23651_R1 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS27140_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS27140_R1 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS27140_R2 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS28428_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS32857_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS35390_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS35392_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS39239_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS39741_R1 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS45210_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS45594_R6 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS50602_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS50611_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS50614_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS50615_R2 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS50615_R7 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS50616_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS6629_R1 | Alkaloid | 7DLGT | high | pass |
| prunus_fruticosa_Pavi_rna-XM_021944706.1_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021945656.1_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021945656.1_R1 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021945656.1_R2 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021945656.1_R8 | Alkaloid | 7DLGT | high | pass |
| prunus_fruticosa_Pavi_rna-XM_021945783.1_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021945783.1_R1 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021945783.1_R5 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021945864.1_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Pavi_rna-XM_021947442.1_R0 | Alkaloid | 7DLGT | medium | pass |
| prunus_fruticosa_Pavi_rna-XM_021947699.1_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Pavi_rna-XM_021949358.1_R0 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Pavi_rna-XM_021949358.1_R1 | Alkaloid | 7DLGT | low | borderline |
| prunus_fruticosa_Pavi_rna-XM_021949942.1_R1 | Alkaloid | 7DLGT | high | pass |
| prunus_fruticosa_Pavi_rna-XM_021949942.1_R2 | Alkaloid | 7DLGT | high | pass |
| prunus_fruticosa_Pavi_rna-XM_021949962.1_R0 | Alkaloid | 7DLGT | high | pass |
| prunus_fruticosa_Pavi_rna-XM_021949962.1_R1 | Alkaloid | 7DLGT | high | pass |