Prunus fruticosa (prunus_fruticosa)
Imported from atlas release summary for Prunus fruticosa.
4671
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4671
Candidate Genes
C4H
6.32%
C3'H/CYP98A
6.13%
BAHD
4.76%
IFS
4.5%
T3O
3.78%
UGT
3.75%
4CL
3.55%
CYP76
3.48%
Other Families
63.73%
More Families (98)
POD
402
3.47%
UFGT
379
3.27%
STR
375
3.24%
F3H
370
3.19%
7DLGT
369
3.18%
DWF4/CYP90B1
282
2.43%
CAD
274
2.36%
SGD
262
2.26%
CODM/T6ODM
214
1.85%
LAC
204
1.76%
H6H
194
1.67%
BR6OX2/CYP85A2
193
1.67%
F3'H/CYP75B
192
1.66%
SMT1/SMT2/SMT3
182
1.57%
NMT
181
1.56%
CAS
181
1.56%
COMT
147
1.27%
7DLH
139
1.2%
GS
138
1.19%
ANR
135
1.16%
CYP90D1
116
1.0%
TRI/TRII
104
0.9%
GES
97
0.84%
IFR
97
0.84%
TPS
96
0.83%
HCT
95
0.82%
CYP71
95
0.82%
CSE
94
0.81%
16OMT
91
0.79%
BR6OX1/CYP85A1
90
0.78%
CCR
89
0.77%
TAT
86
0.74%
RAS
72
0.62%
LAMT
71
0.61%
T16H
70
0.6%
BBE
69
0.6%
NCS
67
0.58%
IO
65
0.56%
8HGO
64
0.55%
PMT
63
0.54%
SLS
63
0.54%
F3'5'H/CYP75A
57
0.49%
ROT3/CYP90C1
49
0.42%
PYKS
47
0.41%
DFR
47
0.41%
G8O/G8H
42
0.36%
F5H/CYP84A
40
0.35%
COR
36
0.31%
FNS
34
0.29%
CPD/CYP90A1
32
0.28%
ANS/LDOX
30
0.26%
CCoAOMT
28
0.24%
HPPR
25
0.22%
AACT
22
0.19%
CYP51G1
21
0.18%
ISY
19
0.16%
MVD
17
0.15%
SQE
16
0.14%
CNMT
15
0.13%
PAL
15
0.13%
DXS
14
0.12%
MPO
13
0.11%
TYDC_DDC
13
0.11%
CYP80B1
12
0.1%
FPPS
12
0.1%
SQS/FDFT1
11
0.09%
DWF7
11
0.09%
CYP719
10
0.09%
CPR
10
0.09%
HMGR
10
0.09%
TDC
8
0.07%
CHS
8
0.07%
6OMT_4OMT_SOMT
7
0.06%
XMT_MXMT_DXMT
7
0.06%
MDS/IspF
7
0.06%
GGPPS
7
0.06%
FLS
6
0.05%
CHI
6
0.05%
DET2
6
0.05%
DWF5
6
0.05%
SMO1/SMO2
6
0.05%
HDR/IspH
5
0.04%
MCT/IspD
4
0.03%
MVK
4
0.03%
DWF1
3
0.03%
HDS/IspG
3
0.03%
ODC
2
0.02%
CPI1
2
0.02%
FK
2
0.02%
DXR
2
0.02%
IDI
2
0.02%
HMGS
2
0.02%
PMK
2
0.02%
ADC
1
0.01%
CYP80F1
1
0.01%
HYD1
1
0.01%
CMK/IspE
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1157 | 19 | BAHD (450) | View species results |
| Alkaloid pathway | 1104 | 25 | SGD (256) | View species results |
| Phenylpropanoid pathway | 1075 | 12 | POD (393) | View species results |
| Flavonoid pathway | 548 | 12 | UFGT (345) | View species results |
| Rosmarinic acid pathway | 452 | 7 | C4H (209) | View species results |
| Steroid pathway | 335 | 13 | CAS (162) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4375 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 719 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_fruticosa_Athal_rna-NM_001084550.1_R4 | Alkaloid | COR | medium | pass | COR__00003__sp_Q9SQ68_COR13_PAPSO |
| prunus_fruticosa_Athal_rna-NM_001336673.1_R0 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| prunus_fruticosa_Athal_rna-NM_104687.1_R2 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Athal_rna-NM_120245.4_R1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Athal_rna-NM_129333.3_R1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_fruticosa_Athal_rna-NM_201774.3_R0 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_fruticosa_Braker_braker1.g12335.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Braker_braker1.g13398.t1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| prunus_fruticosa_Braker_braker1.g22860.t1 | Alkaloid | COR | low | borderline | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| prunus_fruticosa_Braker_braker2.g35854.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Fves_FvH4_2g01020.1_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Fves_FvH4_2g01020.1_R1 | Alkaloid | COR | medium | pass | COR__00005__sp_Q9SQ70_COR11_PAPSO |
| prunus_fruticosa_Fves_FvH4_5g17890.1_R1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Fves_FvH4_7g27320.1_R3 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Mdom_HF01286-RA_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Mdom_HF42653-RA_R4 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS13233_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS34675_R0 | Alkaloid | COR | low | borderline | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS40165_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS6007_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS6007_R2 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Parm_rna-CURHAP_LOCUS7404_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021946303.1_R2 | Alkaloid | COR | low | borderline | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021948596.1_R0 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021950638.1_R0 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021955685.1_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021957088.1_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021957088.1_R1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021965504.1_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021965981.1_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021965983.1_R0 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| prunus_fruticosa_Pavi_rna-XM_021969874.1_R2 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| prunus_fruticosa_Pdul_rna-XM_034350130.1_R0 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| prunus_fruticosa_Pdul_rna-XM_034363838.1_R0 | Alkaloid | COR | medium | pass | COR__00003__sp_Q9SQ68_COR13_PAPSO |
| prunus_fruticosa_Pmum_rna-XM_008242196.2_R0 | Alkaloid | COR | medium | pass | COR__00003__sp_Q9SQ68_COR13_PAPSO |
| prunus_fruticosa_Pper_rna-XM_007205534.2_R1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |