PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Pcin1422580017350 Steroid DWF4/CYP90B1 low borderline
Pcin1516040023660 Steroid DWF4/CYP90B1 low borderline
Pcin1732220053770 Steroid DWF4/CYP90B1 low borderline
Pcin1737380055450 Steroid DWF4/CYP90B1 low borderline
Pcin1843110087950 Steroid DWF4/CYP90B1 low borderline
Pcin1868600099770 Steroid DWF4/CYP90B1 medium borderline
Pcin1896680119550 Steroid DWF4/CYP90B1 low borderline
Pcin1897470120430 Steroid DWF4/CYP90B1 low borderline
Pcin1926960144370 Steroid DWF4/CYP90B1 low borderline
Pcin1941350157110 Steroid DWF4/CYP90B1 low borderline
Pcin1944660160650 Steroid DWF4/CYP90B1 medium borderline
Pcin1948150164390 Steroid DWF4/CYP90B1 medium borderline
Pcin1952360168920 Steroid DWF4/CYP90B1 low borderline
Pcin1955740172400 Steroid DWF4/CYP90B1 low borderline
Pcin1962990182310 Steroid DWF4/CYP90B1 low borderline
Pcin1971600193270 Steroid DWF4/CYP90B1 low borderline
Pcin1978640201900 Steroid DWF4/CYP90B1 low borderline
Pcin1981610206340 Steroid DWF4/CYP90B1 low borderline
Pcin1982290207030 Steroid DWF4/CYP90B1 low borderline
Pcin1982970208410 Steroid DWF4/CYP90B1 low borderline
Pcin1986810214690 Steroid DWF4/CYP90B1 low borderline
Pcin1991480222170 Steroid DWF4/CYP90B1 low borderline
Pcin2002030240410 Steroid DWF4/CYP90B1 medium borderline
Pcin2008710252190 Steroid DWF4/CYP90B1 low borderline
Pcin2010080254710 Steroid DWF4/CYP90B1 medium borderline
Pcin2010820256340 Steroid DWF4/CYP90B1 low borderline
Pcin2011060256710 Steroid DWF4/CYP90B1 medium pass
Pcin2012830260510 Steroid DWF4/CYP90B1 low borderline
Pcin2013780262440 Steroid DWF4/CYP90B1 low borderline
Pcin2021370276720 Steroid DWF4/CYP90B1 low borderline
Pcin2025230285270 Steroid DWF4/CYP90B1 low borderline
Pcin1730820053030 Steroid DWF5 high pass
Pcin1950500167050 Steroid DWF5 medium pass
Pcin1966190186440 Steroid DWF5 medium pass
Pcin2008300251470 Steroid DWF5 low borderline
Pcin2022770279650 Steroid DWF5 medium pass
Pcin1601740034840 Steroid DWF7 medium pass
Pcin1870450100720 Steroid HYD1 low borderline
Pcin2037070303230 Steroid HYD1 high pass
Pcin1941910157860 Steroid ROT3/CYP90C1 medium borderline
Pcin1942340158630 Steroid SMO1/SMO2 medium pass
Pcin2030610295930 Steroid SMO1/SMO2 medium pass
Pcin1249690012610 Steroid SMT1/SMT2/SMT3 low borderline
Pcin1291120015730 Steroid SMT1/SMT2/SMT3 low borderline
Pcin1745400058030 Steroid SMT1/SMT2/SMT3 medium pass
Pcin1825380078860 Steroid SMT1/SMT2/SMT3 low borderline
Pcin1846650089980 Steroid SMT1/SMT2/SMT3 low borderline
Pcin1884810110310 Steroid SMT1/SMT2/SMT3 medium pass
Pcin1887290112880 Steroid SMT1/SMT2/SMT3 medium pass
Pcin1914890133000 Steroid SMT1/SMT2/SMT3 medium pass