Ptychomitrium wilsonii (ptychomitrium_wilsonii)
Imported from atlas release summary for Ptychomitrium wilsonii.
572
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
572
Candidate Genes
C4H
6.25%
BAHD
6.19%
POD
6.13%
C3'H/CYP98A
5.81%
4CL
4.55%
CYP76
4.23%
NMT
3.85%
IFS
2.97%
Other Families
60.01%
More Families (95)
T3O
44
2.78%
STR
39
2.46%
IFR
37
2.34%
BR6OX2/CYP85A2
36
2.27%
DWF4/CYP90B1
34
2.15%
PYKS
33
2.08%
F3'H/CYP75B
33
2.08%
F3H
33
2.08%
PAL
30
1.9%
GS
29
1.83%
CODM/T6ODM
28
1.77%
7DLGT
27
1.71%
UGT
26
1.64%
IO
24
1.52%
UFGT
23
1.45%
CYP71
23
1.45%
CHS
19
1.2%
SMT1/SMT2/SMT3
19
1.2%
CAD
18
1.14%
HCT
16
1.01%
RAS
16
1.01%
TRI/TRII
12
0.76%
T16H
12
0.76%
CAS
12
0.76%
G8O/G8H
11
0.69%
SGD
10
0.63%
H6H
10
0.63%
F3'5'H/CYP75A
10
0.63%
CSE
10
0.63%
COMT
10
0.63%
8HGO
9
0.57%
SLS
9
0.57%
FNS
9
0.57%
LAC
9
0.57%
CCR
9
0.57%
TDC
8
0.51%
NCS
8
0.51%
ANR
8
0.51%
CNMT
7
0.44%
COR
7
0.44%
16OMT
7
0.44%
F5H/CYP84A
7
0.44%
CYP90D1
7
0.44%
CPD/CYP90A1
7
0.44%
ROT3/CYP90C1
7
0.44%
AACT
7
0.44%
SQS/FDFT1
6
0.38%
BR6OX1/CYP85A1
6
0.38%
SQE
6
0.38%
GGPPS
6
0.38%
CYP719
5
0.32%
PMT
5
0.32%
CPR
5
0.32%
DET2
5
0.32%
BBE
4
0.25%
LAMT
4
0.25%
7DLH
4
0.25%
MPO
4
0.25%
ANS/LDOX
4
0.25%
SMO1/SMO2
4
0.25%
MCT/IspD
4
0.25%
HDS/IspG
4
0.25%
MVK
4
0.25%
6OMT_4OMT_SOMT
3
0.19%
CYP80B1
3
0.19%
CHI
3
0.19%
DFR
3
0.19%
FLS
3
0.19%
TAT
3
0.19%
DWF5
3
0.19%
HMGR
3
0.19%
MVD
3
0.19%
ISY
2
0.13%
ADC
2
0.13%
CCoAOMT
2
0.13%
CYP51G1
2
0.13%
HYD1
2
0.13%
IDI
2
0.13%
MDS/IspF
2
0.13%
DXR
2
0.13%
TPS
2
0.13%
FPPS
2
0.13%
HMGS
2
0.13%
CYP80F1
1
0.06%
TYDC_DDC
1
0.06%
GES
1
0.06%
HPPR
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CMK/IspE
1
0.06%
PMK
1
0.06%
HDR/IspH
1
0.06%
DXS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 157 | 11 | POD (87) | View species results |
| Terpenoid pathway | 130 | 19 | BAHD (57) | View species results |
| Alkaloid pathway | 117 | 16 | NMT (23) | View species results |
| Flavonoid pathway | 70 | 9 | UFGT (21) | View species results |
| Rosmarinic acid pathway | 60 | 7 | C4H (25) | View species results |
| Steroid pathway | 38 | 12 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 590 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 130 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pwilscaffold_30133280 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Pwilscaffold_30134040 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Pwilscaffold_30135120 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Pwilscaffold_30137710 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Pwilscaffold_30140930 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Pwilscaffold_30144150 | Terpenoid | BAHD | low | borderline | BAHD__00001__sp_A0A068BGA5_AT1_ACTDE |
| Pwilscaffold_30144220 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Pwilscaffold_40147940 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| Pwilscaffold_40150940 | Terpenoid | BAHD | low | borderline | BAHD__00018__sp_I1MRZ6_DAT32_SOYBN |
| Pwilscaffold_40154720 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Pwilscaffold_40155870 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Pwilscaffold_40158050 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Pwilscaffold_40161010 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Pwilscaffold_50167800 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Pwilscaffold_50169350 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| Pwilscaffold_50175800 | Terpenoid | BAHD | low | borderline | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Pwilscaffold_50175810 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Pwilscaffold_50178050 | Terpenoid | BAHD | low | borderline | BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC |
| Pwilscaffold_50178060 | Terpenoid | BAHD | low | borderline | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Pwilscaffold_50178090 | Terpenoid | BAHD | low | borderline | BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC |
| Pwilscaffold_50178180 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Pwilscaffold_50178370 | Terpenoid | BAHD | low | borderline | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Pwilscaffold_60182780 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Pwilscaffold_60188370 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| Pwilscaffold_60190540 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Pwilscaffold_60191660 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Pwilscaffold_60193610 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Pwilscaffold_60197220 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Pwilscaffold_60200750 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Pwilscaffold_70202490 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Pwilscaffold_70211820 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Pwilscaffold_70212130 | Terpenoid | BAHD | low | borderline | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Pwilscaffold_70215330 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Pwilscaffold_70216240 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Pwilscaffold_70216750 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| Pwilscaffold_70216970 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Pwilscaffold_80220820 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Pwilscaffold_80221740 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Pwilscaffold_80222870 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| Pwilscaffold_80224410 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| Pwilscaffold_90230730 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Pwilscaffold_90234910 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Pwilscaffold_90242280 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Pwilscaffold_90245180 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Pwilscaffold_90245340 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Pwilscaffold_90245360 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Pwilscaffold_90245880 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Pwilscaffold_90247560 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |