Puccinellia tenuiflora (puccinellia_tenuiflora)
Imported from atlas release summary for Puccinellia tenuiflora.
1897
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1897
Candidate Genes
C3'H/CYP98A
6.66%
POD
6.21%
C4H
6.0%
BAHD
5.64%
4CL
3.87%
IFS
3.78%
T3O
3.49%
UGT
3.17%
Other Families
61.18%
More Families (97)
UFGT
147
3.11%
7DLGT
143
3.02%
CYP76
134
2.83%
DWF4/CYP90B1
124
2.62%
F3'H/CYP75B
105
2.22%
BR6OX2/CYP85A2
102
2.16%
F3H
101
2.13%
NMT
92
1.94%
STR
82
1.73%
CAD
82
1.73%
CYP71
82
1.73%
CODM/T6ODM
70
1.48%
SMT1/SMT2/SMT3
67
1.42%
LAC
58
1.23%
PYKS
57
1.2%
SLS
57
1.2%
CAS
48
1.01%
ANR
46
0.97%
CCR
46
0.97%
SGD
45
0.95%
H6H
44
0.93%
HCT
44
0.93%
RAS
44
0.93%
IFR
43
0.91%
CSE
43
0.91%
PAL
42
0.89%
COMT
42
0.89%
CYP90D1
42
0.89%
PMT
40
0.85%
TRI/TRII
36
0.76%
TPS
35
0.74%
T16H
34
0.72%
GES
33
0.7%
FNS
33
0.7%
GS
32
0.68%
CHS
32
0.68%
DFR
32
0.68%
G8O/G8H
31
0.66%
NCS
30
0.63%
CYP51G1
28
0.59%
16OMT
26
0.55%
ANS/LDOX
26
0.55%
8HGO
23
0.49%
F3'5'H/CYP75A
23
0.49%
BBE
20
0.42%
CNMT
19
0.4%
CPD/CYP90A1
19
0.4%
7DLH
18
0.38%
IO
18
0.38%
F5H/CYP84A
15
0.32%
BR6OX1/CYP85A1
14
0.3%
AACT
14
0.3%
COR
13
0.27%
TAT
12
0.25%
CPR
12
0.25%
FPPS
11
0.23%
MPO
10
0.21%
CYP719
9
0.19%
CYP80B1
8
0.17%
CCoAOMT
8
0.17%
HPPR
8
0.17%
ROT3/CYP90C1
8
0.17%
TYDC_DDC
7
0.15%
SQS/FDFT1
7
0.15%
MCT/IspD
7
0.15%
MVK
6
0.13%
HMGR
6
0.13%
ISY
5
0.11%
LAMT
5
0.11%
XMT_MXMT_DXMT
5
0.11%
SMO1/SMO2
5
0.11%
DWF5
5
0.11%
DWF1
5
0.11%
HMGS
5
0.11%
MVD
5
0.11%
DXS
5
0.11%
GGPPS
5
0.11%
CYP80F1
4
0.08%
6OMT_4OMT_SOMT
4
0.08%
FLS
4
0.08%
DET2
4
0.08%
HYD1
4
0.08%
IDI
4
0.08%
ODC
3
0.06%
CHI
3
0.06%
DWF7
2
0.04%
FK
2
0.04%
PMK
2
0.04%
HDR/IspH
2
0.04%
HDS/IspG
2
0.04%
DXR
2
0.04%
CMK/IspE
2
0.04%
GPPS
2
0.04%
TDC
1
0.02%
SQE
1
0.02%
CPI1
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 491 | 11 | POD (269) | View species results |
| Terpenoid pathway | 477 | 20 | BAHD (206) | View species results |
| Alkaloid pathway | 393 | 22 | 7DLGT (71) | View species results |
| Flavonoid pathway | 258 | 13 | UFGT (137) | View species results |
| Rosmarinic acid pathway | 187 | 7 | C4H (89) | View species results |
| Steroid pathway | 91 | 12 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1818 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 355 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pten01G0013470.1 | Alkaloid | SGD | medium | pass |
| Pten01G0028130.1 | Alkaloid | SGD | low | borderline |
| Pten01G0039010.1 | Alkaloid | SGD | medium | pass |
| Pten01G0039020.1 | Alkaloid | SGD | medium | pass |
| Pten01G0039030.1 | Alkaloid | SGD | medium | pass |
| Pten01G0039040.1 | Alkaloid | SGD | medium | pass |
| Pten02G0005090.1 | Alkaloid | SGD | medium | pass |
| Pten02G0005100.1 | Alkaloid | SGD | medium | pass |
| Pten02G0013460.1 | Alkaloid | SGD | medium | pass |
| Pten02G0043000.1 | Alkaloid | SGD | medium | pass |
| Pten02G0054320.1 | Alkaloid | SGD | low | borderline |
| Pten03G0016960.1 | Alkaloid | SGD | medium | pass |
| Pten03G0016970.1 | Alkaloid | SGD | low | borderline |
| Pten03G0017160.1 | Alkaloid | SGD | medium | pass |
| Pten03G0017170.1 | Alkaloid | SGD | medium | pass |
| Pten03G0017180.1 | Alkaloid | SGD | low | borderline |
| Pten03G0018940.1 | Alkaloid | SGD | medium | pass |
| Pten03G0019360.1 | Alkaloid | SGD | medium | pass |
| Pten03G0041160.1 | Alkaloid | SGD | medium | pass |
| Pten04G0009960.1 | Alkaloid | SGD | medium | pass |
| Pten04G0029620.1 | Alkaloid | SGD | medium | pass |
| Pten04G0035390.1 | Alkaloid | SGD | medium | pass |
| Pten04G0035550.1 | Alkaloid | SGD | medium | pass |
| Pten04G0036280.1 | Alkaloid | SGD | medium | pass |
| Pten05G0008650.1 | Alkaloid | SGD | medium | pass |
| Pten05G0043200.1 | Alkaloid | SGD | medium | pass |
| Pten05G0046960.1 | Alkaloid | SGD | medium | pass |
| Pten06G0001820.1 | Alkaloid | SGD | low | borderline |
| Pten06G0001830.1 | Alkaloid | SGD | medium | pass |
| Pten06G0001990.1 | Alkaloid | SGD | medium | pass |
| Pten06G0002000.1 | Alkaloid | SGD | medium | pass |
| Pten06G0002010.1 | Alkaloid | SGD | medium | pass |
| Pten06G0005280.1 | Alkaloid | SGD | medium | pass |
| Pten06G0005290.1 | Alkaloid | SGD | medium | pass |
| Pten06G0005300.1 | Alkaloid | SGD | medium | pass |
| Pten06G0005720.1 | Alkaloid | SGD | medium | pass |
| Pten06G0005730.1 | Alkaloid | SGD | medium | pass |
| Pten06G0034310.1 | Alkaloid | SGD | medium | pass |
| Pten06G0034500.1 | Alkaloid | SGD | medium | pass |
| Pten06G0034960.1 | Alkaloid | SGD | medium | pass |
| Pten06G0045290.1 | Alkaloid | SGD | medium | pass |
| Pten07G0011290.1 | Alkaloid | SGD | medium | pass |
| Pten07G0011300.1 | Alkaloid | SGD | low | borderline |
| Pten07G0012910.1 | Alkaloid | SGD | medium | pass |
| PtenContigUN0000310.1 | Alkaloid | SGD | medium | pass |