Pugionium dolabratum (pugionium_dolabratum)
Imported from atlas release summary for Pugionium dolabratum.
1552
Candidate Protein Records
1173
Pathway-Level Records
2928
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2928
Family-Level Calls
BAHD
6.63%
C3'H/CYP98A
5.67%
C4H
5.57%
POD
5.09%
4CL
4.3%
CYP76
3.72%
IFS
3.69%
T3O
3.04%
Other Families
62.3%
More Families (95)
NMT
87
2.97%
UFGT
86
2.94%
UGT
86
2.94%
7DLGT
82
2.8%
F3H
82
2.8%
STR
66
2.25%
BR6OX2/CYP85A2
61
2.08%
SMT1/SMT2/SMT3
53
1.81%
DWF4/CYP90B1
52
1.78%
CYP71
47
1.61%
SGD
44
1.5%
CODM/T6ODM
44
1.5%
CSE
44
1.5%
F3'H/CYP75B
42
1.43%
IFR
41
1.4%
H6H
39
1.33%
PYKS
36
1.23%
LAC
36
1.23%
CAD
35
1.2%
TRI/TRII
30
1.02%
TAT
28
0.96%
T16H
27
0.92%
HCT
27
0.92%
BBE
25
0.85%
PAL
24
0.82%
RAS
24
0.82%
BR6OX1/CYP85A1
24
0.82%
ANR
22
0.75%
COMT
21
0.72%
CAS
21
0.72%
IO
20
0.68%
LAMT
19
0.65%
SLS
19
0.65%
FNS
19
0.65%
CCR
19
0.65%
GS
18
0.61%
8HGO
17
0.58%
F5H/CYP84A
17
0.58%
CYP90D1
17
0.58%
16OMT
16
0.55%
G8O/G8H
16
0.55%
GGPPS
13
0.44%
CYP51G1
12
0.41%
CPD/CYP90A1
12
0.41%
PMT
11
0.38%
NCS
11
0.38%
COR
10
0.34%
CNMT
10
0.34%
ANS/LDOX
10
0.34%
CPR
10
0.34%
GES
9
0.31%
7DLH
9
0.31%
F3'5'H/CYP75A
9
0.31%
DFR
8
0.27%
ROT3/CYP90C1
8
0.27%
FPPS
8
0.27%
TPS
8
0.27%
MPO
7
0.24%
CCoAOMT
7
0.24%
DET2
7
0.24%
AACT
7
0.24%
CYP80B1
6
0.2%
SQS/FDFT1
6
0.2%
SMO1/SMO2
6
0.2%
MVD
6
0.2%
CYP719
5
0.17%
CHS
5
0.17%
DWF1
5
0.17%
SQE
5
0.17%
MCT/IspD
5
0.17%
ISY
4
0.14%
CHI
4
0.14%
IDI
4
0.14%
MVK
4
0.14%
CMK/IspE
4
0.14%
ADC
3
0.1%
CYP80F1
3
0.1%
DWF7
3
0.1%
DWF5
3
0.1%
DXS
3
0.1%
TDC
2
0.07%
HPPR
2
0.07%
PMK
2
0.07%
HDR/IspH
2
0.07%
HMGR
2
0.07%
HMGS
2
0.07%
ODC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
TYDC_DDC
1
0.03%
HYD1
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
DXR
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 328 | 19 | BAHD (152) | View species results |
| Phenylpropanoid pathway | 292 | 11 | POD (139) | View species results |
| Alkaloid pathway | 245 | 17 | NMT (48) | View species results |
| Flavonoid pathway | 125 | 7 | UFGT (79) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (39) | View species results |
| Steroid pathway | 76 | 11 | SMT1/SMT2/SMT3 (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1041 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 245 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| pugionium_dolabratum_Pdo24209.t1 | Alkaloid | LAMT | medium | borderline |
| pugionium_dolabratum_Pdo25907.t1 | Alkaloid | LAMT | medium | borderline |
| pugionium_dolabratum_Pdo26325.t1 | Alkaloid | LAMT | medium | pass |
| pugionium_dolabratum_Pdo27547.t1 | Alkaloid | LAMT | medium | borderline |
| pugionium_dolabratum_Pdo28925.t1 | Alkaloid | LAMT | medium | borderline |
| pugionium_dolabratum_Pdo03436.t1 | Alkaloid | MPO | high | pass |
| pugionium_dolabratum_Pdo05920.t1 | Alkaloid | MPO | high | pass |
| pugionium_dolabratum_Pdo09088.t1 | Alkaloid | MPO | medium | pass |
| pugionium_dolabratum_Pdo12557.t1 | Alkaloid | MPO | medium | pass |
| pugionium_dolabratum_Pdo23142.t1 | Alkaloid | MPO | medium | pass |
| pugionium_dolabratum_Pdo27773.t1 | Alkaloid | MPO | medium | pass |
| pugionium_dolabratum_Pdo29594.t1 | Alkaloid | MPO | medium | pass |
| pugionium_dolabratum_Pdo04123.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo04128.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo05814.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo06304.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo10667.t2 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo15224.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo17188.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo17878.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo23930.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo28342.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo30177.t1 | Alkaloid | NCS | medium | borderline |
| pugionium_dolabratum_Pdo00098.t1 | Alkaloid | NMT | medium | borderline |
| pugionium_dolabratum_Pdo00115.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo00116.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo00140.t1 | Alkaloid | NMT | low | borderline |
| pugionium_dolabratum_Pdo00785.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo00863.t1 | Alkaloid | NMT | medium | borderline |
| pugionium_dolabratum_Pdo01024.t1 | Alkaloid | NMT | low | borderline |
| pugionium_dolabratum_Pdo01874.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo02051.t1 | Alkaloid | NMT | low | borderline |
| pugionium_dolabratum_Pdo02182.t1 | Alkaloid | NMT | medium | borderline |
| pugionium_dolabratum_Pdo03167.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo03344.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo03489.t1 | Alkaloid | NMT | low | borderline |
| pugionium_dolabratum_Pdo03933.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo04031.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo04056.t1 | Alkaloid | NMT | medium | borderline |
| pugionium_dolabratum_Pdo04721.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo05271.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo05620.t1 | Alkaloid | NMT | medium | borderline |
| pugionium_dolabratum_Pdo05664.t1 | Alkaloid | NMT | medium | borderline |
| pugionium_dolabratum_Pdo05790.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo06049.t1 | Alkaloid | NMT | low | borderline |
| pugionium_dolabratum_Pdo06333.t4 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo06592.t2 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo06729.t1 | Alkaloid | NMT | medium | borderline |
| pugionium_dolabratum_Pdo08077.t1 | Alkaloid | NMT | medium | pass |
| pugionium_dolabratum_Pdo08106.t2 | Alkaloid | NMT | medium | borderline |