Quercus dentata (quercus_dentata)
Imported from atlas release summary for Quercus dentata.
2666
Candidate Protein Records
2300
Pathway-Level Records
5885
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5885
Family-Level Calls
C4H
6.71%
C3'H/CYP98A
6.36%
UGT
4.66%
7DLGT
4.32%
CYP76
4.28%
BAHD
4.11%
UFGT
3.94%
IFS
3.65%
Other Families
61.97%
More Families (95)
T3O
201
3.42%
DWF4/CYP90B1
182
3.09%
POD
175
2.97%
4CL
171
2.91%
F3H
154
2.62%
STR
140
2.38%
CAD
136
2.31%
F3'H/CYP75B
131
2.23%
CAS
120
2.04%
BR6OX2/CYP85A2
103
1.75%
NMT
94
1.6%
H6H
92
1.56%
SMT1/SMT2/SMT3
89
1.51%
GS
88
1.5%
CODM/T6ODM
87
1.48%
CYP71
76
1.29%
TRI/TRII
74
1.26%
SGD
67
1.14%
T16H
65
1.1%
LAC
65
1.1%
TPS
62
1.05%
GES
60
1.02%
COMT
58
0.99%
SLS
55
0.93%
F3'5'H/CYP75A
53
0.9%
IFR
53
0.9%
CYP90D1
51
0.87%
G8O/G8H
49
0.83%
FNS
44
0.75%
16OMT
42
0.71%
7DLH
39
0.66%
ANR
36
0.61%
BR6OX1/CYP85A1
35
0.59%
CSE
32
0.54%
8HGO
30
0.51%
NCS
30
0.51%
PYKS
27
0.46%
F5H/CYP84A
27
0.46%
TAT
27
0.46%
IO
24
0.41%
PMT
24
0.41%
HCT
24
0.41%
CPD/CYP90A1
24
0.41%
LAMT
22
0.37%
CCR
22
0.37%
CCoAOMT
22
0.37%
RAS
21
0.36%
ANS/LDOX
20
0.34%
DFR
19
0.32%
BBE
18
0.31%
COR
17
0.29%
CYP51G1
17
0.29%
PAL
15
0.25%
ISY
14
0.24%
SQE
14
0.24%
FPPS
14
0.24%
CYP80B1
13
0.22%
CNMT
13
0.22%
HPPR
13
0.22%
MPO
12
0.2%
SQS/FDFT1
12
0.2%
ROT3/CYP90C1
11
0.19%
HDR/IspH
11
0.19%
CYP719
10
0.17%
TDC
8
0.14%
TYDC_DDC
6
0.1%
DXS
6
0.1%
AACT
6
0.1%
XMT_MXMT_DXMT
5
0.08%
CHS
5
0.08%
DET2
5
0.08%
GGPPS
5
0.08%
MCT/IspD
5
0.08%
MVK
5
0.08%
MVD
5
0.08%
6OMT_4OMT_SOMT
4
0.07%
CPR
4
0.07%
HMGR
4
0.07%
CHI
3
0.05%
DWF7
3
0.05%
ODC
2
0.03%
CYP80F1
2
0.03%
CPI1
2
0.03%
SMO1/SMO2
2
0.03%
CMK/IspE
2
0.03%
HDS/IspG
2
0.03%
HMGS
2
0.03%
DWF1
1
0.02%
HYD1
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
IDI
1
0.02%
DXR
1
0.02%
PMK
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 627 | 18 | UGT (241) | View species results |
| Alkaloid pathway | 543 | 20 | 7DLGT (146) | View species results |
| Phenylpropanoid pathway | 454 | 11 | POD (168) | View species results |
| Flavonoid pathway | 286 | 11 | UFGT (207) | View species results |
| Steroid pathway | 212 | 12 | CAS (110) | View species results |
| Rosmarinic acid pathway | 178 | 7 | C4H (96) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2404 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 287 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| quercus_dentata_GWHPBRAD020381 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020445 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020446 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020447 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020448 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020449 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020451 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020453 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020455 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD020456 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD020465 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD021044 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD021594 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD021654 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD021655 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD022397 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD022399 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD022400 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD022402 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD022517 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD022809 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD023173 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD023174 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD023175 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD023407 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024170 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024307 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024627 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD024628 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024629 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024634 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024636 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024637 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024657 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD024658 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD025012 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD025314 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD025502 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD025507 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026592 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026879 | Rosmarinic Acid | C4H | medium | pass |
| quercus_dentata_GWHPBRAD026880 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026881 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026882 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026883 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026885 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026886 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026887 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026888 | Rosmarinic Acid | C4H | low | borderline |
| quercus_dentata_GWHPBRAD026889 | Rosmarinic Acid | C4H | low | borderline |