Quercus dentata (quercus_dentata)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.26% Alkaloid pathway 23.61% Phenylpropanoid pathway 19.74% Flavonoid pathway 12.43% Steroid pathway 9.22% Rosmarinic acid pathway 7.74%

Family Distribution

2300 Candidate Genes

C4H 6.71% C3'H/CYP98A 6.36% UGT 4.66% 7DLGT 4.32% CYP76 4.28% BAHD 4.11% UFGT 3.94% IFS 3.65%

Other Families 61.97%

More Families (95)

T3O 201 3.42% DWF4/CYP90B1 182 3.09% POD 175 2.97% 4CL 171 2.91% F3H 154 2.62% STR 140 2.38% CAD 136 2.31% F3'H/CYP75B 131 2.23% CAS 120 2.04% BR6OX2/CYP85A2 103 1.75% NMT 94 1.6% H6H 92 1.56% SMT1/SMT2/SMT3 89 1.51% GS 88 1.5% CODM/T6ODM 87 1.48% CYP71 76 1.29% TRI/TRII 74 1.26% SGD 67 1.14% T16H 65 1.1% LAC 65 1.1% TPS 62 1.05% GES 60 1.02% COMT 58 0.99% SLS 55 0.93% F3'5'H/CYP75A 53 0.9% IFR 53 0.9% CYP90D1 51 0.87% G8O/G8H 49 0.83% FNS 44 0.75% 16OMT 42 0.71% 7DLH 39 0.66% ANR 36 0.61% BR6OX1/CYP85A1 35 0.59% CSE 32 0.54% 8HGO 30 0.51% NCS 30 0.51% PYKS 27 0.46% F5H/CYP84A 27 0.46% TAT 27 0.46% IO 24 0.41% PMT 24 0.41% HCT 24 0.41% CPD/CYP90A1 24 0.41% LAMT 22 0.37% CCR 22 0.37% CCoAOMT 22 0.37% RAS 21 0.36% ANS/LDOX 20 0.34% DFR 19 0.32% BBE 18 0.31% COR 17 0.29% CYP51G1 17 0.29% PAL 15 0.25% ISY 14 0.24% SQE 14 0.24% FPPS 14 0.24% CYP80B1 13 0.22% CNMT 13 0.22% HPPR 13 0.22% MPO 12 0.2% SQS/FDFT1 12 0.2% ROT3/CYP90C1 11 0.19% HDR/IspH 11 0.19% CYP719 10 0.17% TDC 8 0.14% TYDC_DDC 6 0.1% DXS 6 0.1% AACT 6 0.1% XMT_MXMT_DXMT 5 0.08% CHS 5 0.08% DET2 5 0.08% GGPPS 5 0.08% MCT/IspD 5 0.08% MVK 5 0.08% MVD 5 0.08% 6OMT_4OMT_SOMT 4 0.07% CPR 4 0.07% HMGR 4 0.07% CHI 3 0.05% DWF7 3 0.05% ODC 2 0.03% CYP80F1 2 0.03% CPI1 2 0.03% SMO1/SMO2 2 0.03% CMK/IspE 2 0.03% HDS/IspG 2 0.03% HMGS 2 0.03% DWF1 1 0.02% HYD1 1 0.02% DWF5 1 0.02% FK 1 0.02% IDI 1 0.02% DXR 1 0.02% PMK 1 0.02% MDS/IspF 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	627	18	UGT (241)	View species results
Alkaloid pathway	543	20	7DLGT (146)	View species results
Phenylpropanoid pathway	454	11	POD (168)	View species results
Flavonoid pathway	286	11	UFGT (207)	View species results
Steroid pathway	212	12	CAS (110)	View species results
Rosmarinic acid pathway	178	7	C4H (96)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	2404	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	287	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CCR

Gene	Pathway	Family	Confidence	Status	Best Target
quercus_dentata_GWHPBRAD001955	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD002042	Phenylpropanoid	CCR	medium	borderline	CCR__00007__sp_Q9CA28_TKPR2_ARATH
quercus_dentata_GWHPBRAD002857	Phenylpropanoid	CCR	medium	borderline	CCR__00009__sp_Q9SAH9_CCR2_ARATH
quercus_dentata_GWHPBRAD003298	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD003299	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD003300	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD003301	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD003302	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD004730	Phenylpropanoid	CCR	medium	borderline	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
quercus_dentata_GWHPBRAD005854	Phenylpropanoid	CCR	medium	pass	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
quercus_dentata_GWHPBRAD007582	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD014967	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
quercus_dentata_GWHPBRAD017559	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
quercus_dentata_GWHPBRAD017560	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
quercus_dentata_GWHPBRAD022086	Phenylpropanoid	CCR	low	borderline	CCR__00004__sp_G7JEE5_CCR2_MEDTR
quercus_dentata_GWHPBRAD022128	Phenylpropanoid	CCR	low	borderline	CCR__00004__sp_G7JEE5_CCR2_MEDTR
quercus_dentata_GWHPBRAD024699	Phenylpropanoid	CCR	medium	pass	CCR__00007__sp_Q9CA28_TKPR2_ARATH
quercus_dentata_GWHPBRAD024700	Phenylpropanoid	CCR	medium	pass	CCR__00007__sp_Q9CA28_TKPR2_ARATH
quercus_dentata_GWHPBRAD026965	Phenylpropanoid	CCR	low	borderline	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
quercus_dentata_GWHPBRAD030597	Phenylpropanoid	CCR	low	borderline	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
quercus_dentata_GWHPBRAD033865	Phenylpropanoid	CCR	medium	pass	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
quercus_dentata_GWHPBRAD033866	Phenylpropanoid	CCR	medium	borderline	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ