Quercus dentata (quercus_dentata)
Imported from atlas release summary for Quercus dentata.
2300
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2300
Candidate Genes
C4H
6.71%
C3'H/CYP98A
6.36%
UGT
4.66%
7DLGT
4.32%
CYP76
4.28%
BAHD
4.11%
UFGT
3.94%
IFS
3.65%
Other Families
61.97%
More Families (95)
T3O
201
3.42%
DWF4/CYP90B1
182
3.09%
POD
175
2.97%
4CL
171
2.91%
F3H
154
2.62%
STR
140
2.38%
CAD
136
2.31%
F3'H/CYP75B
131
2.23%
CAS
120
2.04%
BR6OX2/CYP85A2
103
1.75%
NMT
94
1.6%
H6H
92
1.56%
SMT1/SMT2/SMT3
89
1.51%
GS
88
1.5%
CODM/T6ODM
87
1.48%
CYP71
76
1.29%
TRI/TRII
74
1.26%
SGD
67
1.14%
T16H
65
1.1%
LAC
65
1.1%
TPS
62
1.05%
GES
60
1.02%
COMT
58
0.99%
SLS
55
0.93%
F3'5'H/CYP75A
53
0.9%
IFR
53
0.9%
CYP90D1
51
0.87%
G8O/G8H
49
0.83%
FNS
44
0.75%
16OMT
42
0.71%
7DLH
39
0.66%
ANR
36
0.61%
BR6OX1/CYP85A1
35
0.59%
CSE
32
0.54%
8HGO
30
0.51%
NCS
30
0.51%
PYKS
27
0.46%
F5H/CYP84A
27
0.46%
TAT
27
0.46%
IO
24
0.41%
PMT
24
0.41%
HCT
24
0.41%
CPD/CYP90A1
24
0.41%
LAMT
22
0.37%
CCR
22
0.37%
CCoAOMT
22
0.37%
RAS
21
0.36%
ANS/LDOX
20
0.34%
DFR
19
0.32%
BBE
18
0.31%
COR
17
0.29%
CYP51G1
17
0.29%
PAL
15
0.25%
ISY
14
0.24%
SQE
14
0.24%
FPPS
14
0.24%
CYP80B1
13
0.22%
CNMT
13
0.22%
HPPR
13
0.22%
MPO
12
0.2%
SQS/FDFT1
12
0.2%
ROT3/CYP90C1
11
0.19%
HDR/IspH
11
0.19%
CYP719
10
0.17%
TDC
8
0.14%
TYDC_DDC
6
0.1%
DXS
6
0.1%
AACT
6
0.1%
XMT_MXMT_DXMT
5
0.08%
CHS
5
0.08%
DET2
5
0.08%
GGPPS
5
0.08%
MCT/IspD
5
0.08%
MVK
5
0.08%
MVD
5
0.08%
6OMT_4OMT_SOMT
4
0.07%
CPR
4
0.07%
HMGR
4
0.07%
CHI
3
0.05%
DWF7
3
0.05%
ODC
2
0.03%
CYP80F1
2
0.03%
CPI1
2
0.03%
SMO1/SMO2
2
0.03%
CMK/IspE
2
0.03%
HDS/IspG
2
0.03%
HMGS
2
0.03%
DWF1
1
0.02%
HYD1
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
IDI
1
0.02%
DXR
1
0.02%
PMK
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 627 | 18 | UGT (241) | View species results |
| Alkaloid pathway | 543 | 20 | 7DLGT (146) | View species results |
| Phenylpropanoid pathway | 454 | 11 | POD (168) | View species results |
| Flavonoid pathway | 286 | 11 | UFGT (207) | View species results |
| Steroid pathway | 212 | 12 | CAS (110) | View species results |
| Rosmarinic acid pathway | 178 | 7 | C4H (96) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2404 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 287 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| quercus_dentata_GWHPBRAD028796 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| quercus_dentata_GWHPBRAD029237 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| quercus_dentata_GWHPBRAD029238 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| quercus_dentata_GWHPBRAD029239 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029240 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029241 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| quercus_dentata_GWHPBRAD029242 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029243 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029244 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029245 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029246 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029273 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| quercus_dentata_GWHPBRAD029274 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029275 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029277 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| quercus_dentata_GWHPBRAD029278 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| quercus_dentata_GWHPBRAD029279 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029280 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029282 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029283 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| quercus_dentata_GWHPBRAD029284 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| quercus_dentata_GWHPBRAD031071 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| quercus_dentata_GWHPBRAD032690 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| quercus_dentata_GWHPBRAD035294 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |