Raddia distichophylla (raddia_distichophylla)
Imported from atlas release summary for Raddia distichophylla.
1293
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1293
Candidate Genes
BAHD
6.35%
C4H
5.81%
UGT
5.78%
UFGT
5.17%
7DLGT
5.1%
C3'H/CYP98A
4.8%
POD
4.33%
4CL
3.73%
Other Families
58.93%
More Families (94)
CYP76
91
3.06%
IFS
76
2.55%
F3'H/CYP75B
69
2.32%
F3H
69
2.32%
T3O
66
2.22%
NMT
54
1.81%
G8O/G8H
51
1.71%
STR
49
1.65%
DWF4/CYP90B1
47
1.58%
BR6OX2/CYP85A2
46
1.54%
SMT1/SMT2/SMT3
44
1.48%
CODM/T6ODM
42
1.41%
RAS
40
1.34%
SLS
37
1.24%
CAD
37
1.24%
PYKS
35
1.18%
TRI/TRII
35
1.18%
CSE
35
1.18%
CAS
35
1.18%
PAL
33
1.11%
HCT
33
1.11%
H6H
31
1.04%
LAC
31
1.04%
PMT
30
1.01%
FNS
29
0.97%
TPS
29
0.97%
ANR
27
0.91%
COMT
27
0.91%
CCR
26
0.87%
16OMT
25
0.84%
GES
23
0.77%
IFR
23
0.77%
SGD
20
0.67%
CYP90D1
20
0.67%
CYP71
18
0.6%
F3'5'H/CYP75A
17
0.57%
TAT
15
0.5%
7DLH
14
0.47%
GS
14
0.47%
CPD/CYP90A1
14
0.47%
DFR
13
0.44%
IO
11
0.37%
LAMT
11
0.37%
NCS
11
0.37%
8HGO
11
0.37%
COR
10
0.34%
CYP80B1
10
0.34%
CHS
10
0.34%
F5H/CYP84A
10
0.34%
ROT3/CYP90C1
10
0.34%
BBE
9
0.3%
CPR
9
0.3%
BR6OX1/CYP85A1
9
0.3%
FPPS
9
0.3%
CNMT
8
0.27%
T16H
8
0.27%
ANS/LDOX
8
0.27%
CCoAOMT
8
0.27%
TYDC_DDC
7
0.24%
CYP719
6
0.2%
MPO
6
0.2%
XMT_MXMT_DXMT
6
0.2%
FLS
6
0.2%
HPPR
6
0.2%
SMO1/SMO2
6
0.2%
HMGS
6
0.2%
AACT
6
0.2%
ISY
5
0.17%
TDC
5
0.17%
CYP51G1
4
0.13%
DWF1
4
0.13%
SQS/FDFT1
4
0.13%
MVK
4
0.13%
GGPPS
4
0.13%
DXS
4
0.13%
CPI1
3
0.1%
MVD
3
0.1%
ADC
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
CYP80F1
2
0.07%
CHI
2
0.07%
HYD1
2
0.07%
DWF7
2
0.07%
DET2
2
0.07%
CMK/IspE
2
0.07%
MCT/IspD
2
0.07%
PMK
2
0.07%
HMGR
2
0.07%
ODC
1
0.03%
FK
1
0.03%
DXR
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 372 | 16 | UGT (146) | View species results |
| Alkaloid pathway | 284 | 24 | 7DLGT (72) | View species results |
| Phenylpropanoid pathway | 265 | 13 | POD (108) | View species results |
| Flavonoid pathway | 211 | 13 | UFGT (141) | View species results |
| Rosmarinic acid pathway | 97 | 7 | 4CL (23) | View species results |
| Steroid pathway | 64 | 11 | SMT1/SMT2/SMT3 (24) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 952 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 262 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| RdisGWHAAKD000020290001000.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| RdisGWHAAKD000020290001010.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| RdisGWHAAKD000036680002220.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| RdisGWHAAKD000119370013060.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RdisGWHAAKD000146000022720.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| RdisGWHAAKD000146540023930.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| RdisGWHAAKD000167860032020.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RdisGWHAAKD000191990040270.1 | Flavonoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| RdisGWHAAKD000203130044310.1 | Flavonoid | 4CL | medium | pass | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| RdisGWHAAKD000209420048570.1 | Flavonoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000218950054960.1 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| RdisGWHAAKD000243660063700.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000282210087790.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RdisGWHAAKD000310370103380.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RdisGWHAAKD000311430105920.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RdisGWHAAKD000326950115660.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RdisGWHAAKD000356970140650.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| RdisGWHAAKD000361720142920.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000361720142990.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| RdisGWHAAKD000361970143890.1 | Flavonoid | 4CL | low | borderline | 4CL__00004__sp_O24146_4CL2_TOBAC |
| RdisGWHAAKD000381910158120.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| RdisGWHAAKD000381990160730.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| RdisGWHAAKD000382050162480.1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| RdisGWHAAKD000382050162820.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000382050162830.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000382050163590.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000382140169510.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| RdisGWHAAKD000382170172550.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RdisGWHAAKD000382230178080.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000382230178090.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000382380193110.1 | Flavonoid | 4CL | medium | pass | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| RdisGWHAAKD000382480203500.1 | Flavonoid | 4CL | medium | pass | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| RdisGWHAAKD000382530209380.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RdisGWHAAKD000382530209390.1 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| RdisGWHAAKD000382590219100.1 | Flavonoid | 4CL | medium | pass | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| RdisGWHAAKD000382610226000.1 | Flavonoid | 4CL | medium | pass | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| RdisGWHAAKD000382620226730.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000020290001000.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| RdisGWHAAKD000020290001010.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| RdisGWHAAKD000036680002220.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| RdisGWHAAKD000119370013060.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RdisGWHAAKD000146000022720.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| RdisGWHAAKD000146540023930.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| RdisGWHAAKD000167860032020.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RdisGWHAAKD000191990040270.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| RdisGWHAAKD000203130044310.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| RdisGWHAAKD000209420048570.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000218950054960.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| RdisGWHAAKD000243660063700.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RdisGWHAAKD000282210087790.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |