Raddia distichophylla (raddia_distichophylla)
Imported from atlas release summary for Raddia distichophylla.
1497
Candidate Protein Records
1293
Pathway-Level Records
2978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2978
Family-Level Calls
BAHD
6.35%
C4H
5.81%
UGT
5.78%
UFGT
5.17%
7DLGT
5.1%
C3'H/CYP98A
4.8%
POD
4.33%
4CL
3.73%
Other Families
58.93%
More Families (94)
CYP76
91
3.06%
IFS
76
2.55%
F3'H/CYP75B
69
2.32%
F3H
69
2.32%
T3O
66
2.22%
NMT
54
1.81%
G8O/G8H
51
1.71%
STR
49
1.65%
DWF4/CYP90B1
47
1.58%
BR6OX2/CYP85A2
46
1.54%
SMT1/SMT2/SMT3
44
1.48%
CODM/T6ODM
42
1.41%
RAS
40
1.34%
SLS
37
1.24%
CAD
37
1.24%
PYKS
35
1.18%
TRI/TRII
35
1.18%
CSE
35
1.18%
CAS
35
1.18%
PAL
33
1.11%
HCT
33
1.11%
H6H
31
1.04%
LAC
31
1.04%
PMT
30
1.01%
FNS
29
0.97%
TPS
29
0.97%
ANR
27
0.91%
COMT
27
0.91%
CCR
26
0.87%
16OMT
25
0.84%
GES
23
0.77%
IFR
23
0.77%
SGD
20
0.67%
CYP90D1
20
0.67%
CYP71
18
0.6%
F3'5'H/CYP75A
17
0.57%
TAT
15
0.5%
7DLH
14
0.47%
GS
14
0.47%
CPD/CYP90A1
14
0.47%
DFR
13
0.44%
IO
11
0.37%
LAMT
11
0.37%
NCS
11
0.37%
8HGO
11
0.37%
COR
10
0.34%
CYP80B1
10
0.34%
CHS
10
0.34%
F5H/CYP84A
10
0.34%
ROT3/CYP90C1
10
0.34%
BBE
9
0.3%
CPR
9
0.3%
BR6OX1/CYP85A1
9
0.3%
FPPS
9
0.3%
CNMT
8
0.27%
T16H
8
0.27%
ANS/LDOX
8
0.27%
CCoAOMT
8
0.27%
TYDC_DDC
7
0.24%
CYP719
6
0.2%
MPO
6
0.2%
XMT_MXMT_DXMT
6
0.2%
FLS
6
0.2%
HPPR
6
0.2%
SMO1/SMO2
6
0.2%
HMGS
6
0.2%
AACT
6
0.2%
ISY
5
0.17%
TDC
5
0.17%
CYP51G1
4
0.13%
DWF1
4
0.13%
SQS/FDFT1
4
0.13%
MVK
4
0.13%
GGPPS
4
0.13%
DXS
4
0.13%
CPI1
3
0.1%
MVD
3
0.1%
ADC
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
CYP80F1
2
0.07%
CHI
2
0.07%
HYD1
2
0.07%
DWF7
2
0.07%
DET2
2
0.07%
CMK/IspE
2
0.07%
MCT/IspD
2
0.07%
PMK
2
0.07%
HMGR
2
0.07%
ODC
1
0.03%
FK
1
0.03%
DXR
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 372 | 16 | UGT (146) | View species results |
| Alkaloid pathway | 284 | 24 | 7DLGT (72) | View species results |
| Phenylpropanoid pathway | 265 | 13 | POD (108) | View species results |
| Flavonoid pathway | 211 | 13 | UFGT (141) | View species results |
| Rosmarinic acid pathway | 97 | 7 | 4CL (23) | View species results |
| Steroid pathway | 64 | 11 | SMT1/SMT2/SMT3 (24) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 952 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 262 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| RdisGWHAAKD000222680057230.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000222680057240.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000254280067830.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000279200084130.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000281150087050.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000282180087510.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000289450090580.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000311800107030.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000315030109470.1 | Alkaloid | SLS | low | borderline |
| RdisGWHAAKD000326950115540.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000327770116260.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000345120130580.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000353430137430.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000353430137440.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000353430137450.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000353430137480.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000353430137490.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000361970144870.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000361970144880.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000361970145420.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000370700153320.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000370700153340.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000381980160270.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000381980160280.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000381980160410.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382050163800.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382440198640.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382440199130.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382440199760.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382440199840.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382490204290.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382580217630.1 | Alkaloid | SLS | medium | borderline |
| RdisGWHAAKD000382590219590.1 | Alkaloid | SLS | low | borderline |
| RdisGWHAAKD000095750007310.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000142690019930.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000175490033890.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000191790040250.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000201320042870.1 | Alkaloid | STR | medium | pass |
| RdisGWHAAKD000207680047580.1 | Alkaloid | STR | medium | pass |
| RdisGWHAAKD000211690050290.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000218950055090.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000218950055100.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000259040073170.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000272700078350.1 | Alkaloid | STR | medium | pass |
| RdisGWHAAKD000272700078360.1 | Alkaloid | STR | medium | pass |
| RdisGWHAAKD000276800079970.1 | Alkaloid | STR | medium | pass |
| RdisGWHAAKD000276800081130.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000295250093670.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000308230103070.1 | Alkaloid | STR | low | borderline |
| RdisGWHAAKD000311180105510.1 | Alkaloid | STR | low | borderline |