PlantSME Plant secondary metabolism enzyme database

Rhizophora apiculata (rhizophora_apiculata)

Imported from atlas release summary for Rhizophora apiculata.

1382
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 448 19 BAHD (154) View species results
Alkaloid pathway 295 21 7DLGT (59) View species results
Phenylpropanoid pathway 242 11 POD (105) View species results
Flavonoid pathway 201 9 UFGT (125) View species results
Rosmarinic acid pathway 122 7 C4H (48) View species results
Steroid pathway 74 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1220 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 288 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
rhizophora_apiculata_RA_07194 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
rhizophora_apiculata_RA_07763 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
rhizophora_apiculata_RA_07936 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
rhizophora_apiculata_RA_08172 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
rhizophora_apiculata_RA_08770 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
rhizophora_apiculata_RA_09857 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_11040 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
rhizophora_apiculata_RA_11260 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
rhizophora_apiculata_RA_12810 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
rhizophora_apiculata_RA_14544 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
rhizophora_apiculata_RA_14971 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
rhizophora_apiculata_RA_15424 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
rhizophora_apiculata_RA_16644 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
rhizophora_apiculata_RA_17026 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_17027 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_17167 Rosmarinic Acid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
rhizophora_apiculata_RA_17204 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
rhizophora_apiculata_RA_18024 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
rhizophora_apiculata_RA_18025 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
rhizophora_apiculata_RA_18031 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_18950 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
rhizophora_apiculata_RA_21176 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_21177 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_21326 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_21460 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
rhizophora_apiculata_RA_22326 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
rhizophora_apiculata_RA_22385 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
rhizophora_apiculata_RA_22507 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
rhizophora_apiculata_RA_23169 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
rhizophora_apiculata_RA_23520 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
rhizophora_apiculata_RA_24041 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
rhizophora_apiculata_RA_24627 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH