Rhododendron ovatum (rhododendron_ovatum)
Imported from atlas release summary for Rhododendron ovatum.
2622
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2622
Candidate Genes
C4H
6.44%
C3'H/CYP98A
5.78%
UGT
5.51%
7DLGT
5.08%
UFGT
5.05%
BAHD
4.84%
IFS
3.91%
CYP76
3.8%
Other Families
59.59%
More Families (98)
4CL
204
3.32%
T3O
192
3.13%
POD
184
3.0%
F3H
174
2.84%
CAS
146
2.38%
CAD
132
2.15%
DWF4/CYP90B1
132
2.15%
F3'H/CYP75B
123
2.0%
TPS
119
1.94%
CODM/T6ODM
114
1.86%
GES
111
1.81%
BR6OX2/CYP85A2
109
1.78%
STR
101
1.65%
NMT
86
1.4%
H6H
76
1.24%
IO
65
1.06%
SMT1/SMT2/SMT3
64
1.04%
HCT
61
0.99%
CYP71
61
0.99%
IFR
56
0.91%
LAC
54
0.88%
CYP90D1
54
0.88%
CSE
53
0.86%
GS
52
0.85%
T16H
49
0.8%
TAT
49
0.8%
RAS
46
0.75%
BR6OX1/CYP85A1
45
0.73%
SGD
43
0.7%
COMT
41
0.67%
PYKS
40
0.65%
7DLH
39
0.64%
16OMT
37
0.6%
TRI/TRII
36
0.59%
SLS
36
0.59%
BBE
32
0.52%
ANR
32
0.52%
G8O/G8H
30
0.49%
F5H/CYP84A
29
0.47%
F3'5'H/CYP75A
28
0.46%
CCR
28
0.46%
CPD/CYP90A1
28
0.46%
LAMT
27
0.44%
FNS
24
0.39%
PMT
23
0.37%
8HGO
23
0.37%
ROT3/CYP90C1
21
0.34%
CHS
18
0.29%
CYP51G1
18
0.29%
COR
17
0.28%
DFR
17
0.28%
HPPR
15
0.24%
CYP80B1
14
0.23%
ANS/LDOX
13
0.21%
NCS
12
0.2%
PAL
12
0.2%
AACT
12
0.2%
CNMT
11
0.18%
CYP719
10
0.16%
CPR
10
0.16%
MPO
9
0.15%
CCoAOMT
9
0.15%
ADC
8
0.13%
TYDC_DDC
8
0.13%
CHI
8
0.13%
MVD
8
0.13%
DXS
8
0.13%
GGPPS
8
0.13%
DET2
7
0.11%
SQS/FDFT1
7
0.11%
HMGR
6
0.1%
FPPS
6
0.1%
MVK
6
0.1%
ISY
5
0.08%
SQE
5
0.08%
HDR/IspH
5
0.08%
PMK
5
0.08%
CPI1
4
0.07%
DWF7
4
0.07%
FK
4
0.07%
SMO1/SMO2
4
0.07%
HYD1
4
0.07%
HMGS
4
0.07%
ODC
3
0.05%
DWF1
3
0.05%
CYP80F1
2
0.03%
TDC
2
0.03%
FLS
2
0.03%
DWF5
2
0.03%
DXR
2
0.03%
HDS/IspG
2
0.03%
CMK/IspE
2
0.03%
MCT/IspD
2
0.03%
6OMT_4OMT_SOMT
1
0.02%
XMT_MXMT_DXMT
1
0.02%
GPPS
1
0.02%
IDI
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 798 | 19 | UGT (315) | View species results |
| Alkaloid pathway | 549 | 25 | 7DLGT (142) | View species results |
| Phenylpropanoid pathway | 446 | 12 | POD (170) | View species results |
| Flavonoid pathway | 397 | 13 | UFGT (287) | View species results |
| Rosmarinic acid pathway | 229 | 7 | C4H (103) | View species results |
| Steroid pathway | 203 | 12 | CAS (128) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2308 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 404 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Rova01G0003180 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova01G0003190 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova01G0004220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova01G0004740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova01G0017220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova01G0017230 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova01G0030000 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova01G0030310 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| Rova01G0030320 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova01G0030330 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova02G0003900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0004950 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova02G0004970 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova02G0005020 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova02G0008630 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0010820 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0015430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0016310 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0026450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0031880 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0031890 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova02G0031910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova03G0010640 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova03G0011590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova03G0011600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova03G0012640 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova03G0013410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova03G0031710 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova04G0001780 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova04G0001790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova04G0004410 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova04G0009840 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Rova04G0017490 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova04G0017500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova04G0022610 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova04G0022930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova05G0014680 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova05G0019770 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova05G0020790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova05G0020800 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova05G0020950 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova05G0033750 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova06G0000440 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova06G0005620 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova06G0015640 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova06G0021630 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova07G0001280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova07G0005000 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova07G0011480 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Rova07G0011500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |