Rhododendron vialii (rhododendron_vialii)
Imported from atlas release summary for Rhododendron vialii.
4644
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4644
Candidate Genes
UGT
6.01%
C4H
5.89%
BAHD
5.66%
C3'H/CYP98A
5.56%
7DLGT
5.54%
UFGT
5.35%
IFS
3.98%
4CL
3.8%
Other Families
58.21%
More Families (96)
CYP76
356
3.42%
T3O
303
2.91%
POD
303
2.91%
F3H
268
2.57%
DWF4/CYP90B1
238
2.28%
CAS
207
1.99%
NMT
205
1.97%
CAD
187
1.79%
BR6OX2/CYP85A2
180
1.73%
STR
177
1.7%
F3'H/CYP75B
174
1.67%
CODM/T6ODM
173
1.66%
TPS
149
1.43%
GES
136
1.31%
H6H
116
1.11%
CYP71
114
1.09%
SMT1/SMT2/SMT3
112
1.08%
IFR
109
1.05%
GS
106
1.02%
HCT
102
0.98%
IO
99
0.95%
LAC
99
0.95%
CYP90D1
94
0.9%
TRI/TRII
91
0.87%
RAS
90
0.86%
SGD
85
0.82%
ANR
84
0.81%
T16H
80
0.77%
TAT
79
0.76%
CSE
78
0.75%
7DLH
70
0.67%
BBE
67
0.64%
PYKS
66
0.63%
SLS
65
0.62%
BR6OX1/CYP85A1
64
0.61%
COMT
61
0.59%
CCR
55
0.53%
G8O/G8H
51
0.49%
8HGO
51
0.49%
F3'5'H/CYP75A
46
0.44%
FNS
44
0.42%
PMT
42
0.4%
CPD/CYP90A1
41
0.39%
16OMT
36
0.35%
F5H/CYP84A
36
0.35%
COR
34
0.33%
CYP51G1
33
0.32%
CNMT
29
0.28%
CHS
28
0.27%
ROT3/CYP90C1
28
0.27%
LAMT
27
0.26%
AACT
27
0.26%
DFR
24
0.23%
PAL
24
0.23%
GGPPS
22
0.21%
ANS/LDOX
21
0.2%
CCoAOMT
20
0.19%
NCS
19
0.18%
MPO
17
0.16%
CHI
17
0.16%
HPPR
17
0.16%
SQS/FDFT1
17
0.16%
MVD
17
0.16%
CYP80B1
16
0.15%
DET2
16
0.15%
CYP719
15
0.14%
TYDC_DDC
13
0.12%
CPR
13
0.12%
PMK
13
0.12%
FPPS
13
0.12%
HMGR
12
0.12%
DXS
11
0.11%
ISY
10
0.1%
SQE
10
0.1%
SMO1/SMO2
9
0.09%
ODC
8
0.08%
MVK
8
0.08%
DWF7
7
0.07%
HDS/IspG
7
0.07%
ADC
6
0.06%
FK
6
0.06%
DWF1
6
0.06%
HDR/IspH
6
0.06%
HMGS
6
0.06%
DXR
6
0.06%
TDC
5
0.05%
MDS/IspF
5
0.05%
FLS
4
0.04%
HYD1
4
0.04%
DWF5
4
0.04%
MCT/IspD
4
0.04%
CMK/IspE
3
0.03%
XMT_MXMT_DXMT
2
0.02%
CPI1
2
0.02%
GPPS
2
0.02%
IDI
2
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1473 | 20 | UGT (602) | View species results |
| Alkaloid pathway | 984 | 26 | 7DLGT (261) | View species results |
| Phenylpropanoid pathway | 753 | 11 | POD (297) | View species results |
| Flavonoid pathway | 712 | 13 | UFGT (519) | View species results |
| Rosmarinic acid pathway | 393 | 7 | C4H (175) | View species results |
| Steroid pathway | 329 | 13 | CAS (191) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 3711 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 782 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP719
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| rhododendron_vialii_GWHPCAXW007706 | Alkaloid | CYP719 | medium | borderline | CYP719__00005__sp_B5UAQ8_C7195_ESCCA |
| rhododendron_vialii_GWHPCAXW010717 | Alkaloid | CYP719 | medium | borderline | CYP719__00005__sp_B5UAQ8_C7195_ESCCA |
| rhododendron_vialii_GWHPCAXW041177 | Alkaloid | CYP719 | medium | borderline | CYP719__00004__sp_B1NF20_C719E_ARGME |
| rhododendron_vialii_GWHPCAXW041178 | Alkaloid | CYP719 | medium | borderline | CYP719__00004__sp_B1NF20_C719E_ARGME |
| rhododendron_vialii_GWHPCAXW044466 | Alkaloid | CYP719 | medium | borderline | CYP719__00004__sp_B1NF20_C719E_ARGME |
| rhododendron_vialii_GWHPCAXW044467 | Alkaloid | CYP719 | medium | borderline | CYP719__00009__sp_Q50LH3_C7192_ESCCA |
| rhododendron_vialii_GWHPCAXW057267 | Alkaloid | CYP719 | medium | borderline | CYP719__00002__sp_B1NF18_C719B_PAPSO |
| rhododendron_vialii_GWHPCAXW057631 | Alkaloid | CYP719 | medium | borderline | CYP719__00011__sp_Q948Y1_C719A_COPJA |
| rhododendron_vialii_GWHPCAXW064570 | Alkaloid | CYP719 | medium | borderline | CYP719__00001__sp_A0A7T9QPT0_C719A_PIPNI |
| rhododendron_vialii_GWHPCAXW065185 | Alkaloid | CYP719 | medium | borderline | CYP719__00004__sp_B1NF20_C719E_ARGME |
| rhododendron_vialii_GWHPCAXW065187 | Alkaloid | CYP719 | medium | borderline | CYP719__00004__sp_B1NF20_C719E_ARGME |
| rhododendron_vialii_GWHPCAXW065188 | Alkaloid | CYP719 | medium | borderline | CYP719__00004__sp_B1NF20_C719E_ARGME |
| rhododendron_vialii_GWHPCAXW067026 | Alkaloid | CYP719 | medium | borderline | CYP719__00001__sp_A0A7T9QPT0_C719A_PIPNI |
| rhododendron_vialii_GWHPCAXW069375 | Alkaloid | CYP719 | medium | borderline | CYP719__00011__sp_Q948Y1_C719A_COPJA |
| rhododendron_vialii_GWHPCAXW070407 | Alkaloid | CYP719 | medium | pass | CYP719__00008__sp_L7T8H2_C719A_SINHE |