Ricinus communis (ricinus_communis)
Imported from atlas release summary for Ricinus communis.
1747
Candidate Protein Records
1492
Pathway-Level Records
3650
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3650
Family-Level Calls
C4H
6.25%
C3'H/CYP98A
6.05%
BAHD
5.73%
CYP76
4.03%
4CL
3.86%
UGT
3.75%
IFS
3.59%
POD
3.51%
Other Families
63.23%
More Families (96)
T3O
127
3.48%
UFGT
121
3.32%
7DLGT
118
3.23%
F3H
99
2.71%
DWF4/CYP90B1
90
2.47%
F3'H/CYP75B
78
2.14%
TRI/TRII
71
1.95%
NMT
70
1.92%
CODM/T6ODM
66
1.81%
STR
60
1.64%
BR6OX2/CYP85A2
59
1.62%
CYP71
55
1.51%
CAS
53
1.45%
SMT1/SMT2/SMT3
53
1.45%
TPS
52
1.42%
CAD
48
1.32%
GES
47
1.29%
H6H
45
1.23%
CYP90D1
39
1.07%
CSE
36
0.99%
LAC
36
0.99%
T16H
35
0.96%
COMT
35
0.96%
16OMT
34
0.93%
IFR
33
0.9%
TAT
33
0.9%
HCT
32
0.88%
GS
30
0.82%
IO
29
0.79%
F3'5'H/CYP75A
27
0.74%
FNS
25
0.68%
SGD
24
0.66%
ANR
24
0.66%
RAS
24
0.66%
F5H/CYP84A
23
0.63%
PYKS
22
0.6%
BBE
21
0.58%
7DLH
21
0.58%
G8O/G8H
21
0.58%
PAL
21
0.58%
PMT
18
0.49%
CCR
18
0.49%
NCS
17
0.47%
CNMT
17
0.47%
BR6OX1/CYP85A1
16
0.44%
SLS
15
0.41%
CYP51G1
15
0.41%
COR
13
0.36%
CYP719
12
0.33%
CPD/CYP90A1
12
0.33%
AACT
12
0.33%
8HGO
11
0.3%
LAMT
11
0.3%
ANS/LDOX
10
0.27%
HPPR
10
0.27%
CYP80B1
9
0.25%
CCoAOMT
9
0.25%
MPO
8
0.22%
FPPS
8
0.22%
6OMT_4OMT_SOMT
7
0.19%
ISY
7
0.19%
DFR
7
0.19%
CPR
7
0.19%
ROT3/CYP90C1
7
0.19%
SQE
7
0.19%
GGPPS
7
0.19%
ODC
6
0.16%
CHS
6
0.16%
SQS/FDFT1
6
0.16%
MVK
6
0.16%
TYDC_DDC
5
0.14%
XMT_MXMT_DXMT
4
0.11%
DET2
4
0.11%
DXS
4
0.11%
TDC
3
0.08%
CHI
3
0.08%
DWF1
3
0.08%
HMGR
3
0.08%
MVD
3
0.08%
MCT/IspD
3
0.08%
ADC
2
0.05%
FLS
2
0.05%
SMO1/SMO2
2
0.05%
PMK
2
0.05%
CMK/IspE
2
0.05%
HMGS
2
0.05%
FK
1
0.03%
HYD1
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
DWF7
1
0.03%
HDS/IspG
1
0.03%
HDR/IspH
1
0.03%
IDI
1
0.03%
DXR
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 439 | 19 | BAHD (169) | View species results |
| Alkaloid pathway | 347 | 21 | 7DLGT (67) | View species results |
| Phenylpropanoid pathway | 291 | 11 | POD (120) | View species results |
| Flavonoid pathway | 172 | 11 | UFGT (109) | View species results |
| Rosmarinic acid pathway | 137 | 7 | C4H (52) | View species results |
| Steroid pathway | 106 | 13 | CAS (45) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1417 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 265 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Rcom301310209250.1 | Alkaloid | NMT | medium | borderline |
| Rcom301360209870.1 | Alkaloid | NMT | medium | pass |
| Rcom301470218340.1 | Alkaloid | NMT | medium | pass |
| Rcom301470218350.1 | Alkaloid | NMT | medium | pass |
| Rcom301480224730.1 | Alkaloid | NMT | medium | borderline |
| Rcom301560226780.1 | Alkaloid | NMT | medium | pass |
| Rcom301560227100.1 | Alkaloid | NMT | medium | pass |
| Rcom301690231270.1 | Alkaloid | NMT | low | borderline |
| Rcom301700237050.1 | Alkaloid | NMT | medium | borderline |
| Rcom301700238810.1 | Alkaloid | NMT | medium | borderline |
| Rcom301700240430.1 | Alkaloid | NMT | medium | pass |
| Rcom301900253540.1 | Alkaloid | NMT | low | borderline |
| Rcom333730276370.1 | Alkaloid | NMT | medium | borderline |
| Rcom407510291750.1 | Alkaloid | NMT | low | borderline |
| Rcom423900293530.1 | Alkaloid | NMT | medium | pass |
| Rcom477210298520.1 | Alkaloid | NMT | medium | pass |
| Rcom299290156230.1 | Alkaloid | ODC | medium | pass |
| Rcom301700238860.1 | Alkaloid | ODC | medium | pass |
| Rcom301700238870.1 | Alkaloid | ODC | medium | pass |
| Rcom301700238880.1 | Alkaloid | ODC | medium | pass |
| Rcom301700238910.1 | Alkaloid | ODC | medium | pass |
| Rcom301700238920.1 | Alkaloid | ODC | medium | pass |
| Rcom281930021140.1 | Alkaloid | PMT | low | borderline |
| Rcom286100030680.1 | Alkaloid | PMT | medium | borderline |
| Rcom296340060750.1 | Alkaloid | PMT | low | borderline |
| Rcom296870076890.1 | Alkaloid | PMT | low | borderline |
| Rcom297260084430.1 | Alkaloid | PMT | medium | pass |
| Rcom297390092200.1 | Alkaloid | PMT | medium | pass |
| Rcom298220117080.1 | Alkaloid | PMT | low | borderline |
| Rcom299570163920.1 | Alkaloid | PMT | low | borderline |
| Rcom300760190080.1 | Alkaloid | PMT | medium | pass |
| Rcom301310205330.1 | Alkaloid | PMT | low | borderline |
| Rcom301310206920.1 | Alkaloid | PMT | low | borderline |
| Rcom301470219410.1 | Alkaloid | PMT | low | borderline |
| Rcom301470222320.1 | Alkaloid | PMT | medium | borderline |
| Rcom301480224340.1 | Alkaloid | PMT | medium | pass |
| Rcom301480224390.1 | Alkaloid | PMT | medium | pass |
| Rcom301480224410.1 | Alkaloid | PMT | medium | pass |
| Rcom301690231490.1 | Alkaloid | PMT | medium | borderline |
| Rcom301700237130.1 | Alkaloid | PMT | low | borderline |
| Rcom275240004400.1 | Alkaloid | PYKS | low | borderline |
| Rcom279640014860.1 | Alkaloid | PYKS | low | borderline |
| Rcom284550027120.1 | Alkaloid | PYKS | low | borderline |
| Rcom296480066370.1 | Alkaloid | PYKS | high | pass |
| Rcom296900077150.1 | Alkaloid | PYKS | low | borderline |
| Rcom296900077160.1 | Alkaloid | PYKS | low | borderline |
| Rcom297110082990.1 | Alkaloid | PYKS | high | pass |
| Rcom297260086090.1 | Alkaloid | PYKS | low | borderline |
| Rcom297390092650.1 | Alkaloid | PYKS | low | borderline |
| Rcom297770101680.1 | Alkaloid | PYKS | low | borderline |