Rosa multiflora (rosa_multiflora)
Imported from atlas release summary for Rosa multiflora.
3404
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3404
Candidate Genes
C4H
6.6%
UGT
5.95%
C3'H/CYP98A
5.46%
BAHD
5.2%
7DLGT
4.93%
UFGT
4.47%
CYP76
3.72%
4CL
3.67%
Other Families
60.01%
More Families (98)
IFS
282
3.55%
T3O
240
3.02%
POD
204
2.57%
F3H
203
2.56%
BR6OX2/CYP85A2
160
2.02%
DWF4/CYP90B1
155
1.95%
F3'H/CYP75B
154
1.94%
NMT
148
1.86%
CAD
142
1.79%
H6H
128
1.61%
CODM/T6ODM
123
1.55%
CAS
122
1.54%
STR
107
1.35%
LAC
102
1.29%
SMT1/SMT2/SMT3
101
1.27%
CYP71
95
1.2%
TRI/TRII
89
1.12%
TPS
87
1.1%
GES
84
1.06%
GS
84
1.06%
HCT
76
0.96%
CSE
76
0.96%
G8O/G8H
70
0.88%
7DLH
69
0.87%
F3'5'H/CYP75A
67
0.84%
SLS
66
0.83%
CYP90D1
63
0.79%
T16H
60
0.76%
FNS
59
0.74%
TAT
59
0.74%
SQE
56
0.71%
IO
54
0.68%
IFR
53
0.67%
SGD
52
0.66%
COR
52
0.66%
COMT
52
0.66%
BR6OX1/CYP85A1
49
0.62%
PMT
47
0.59%
ANR
47
0.59%
RAS
45
0.57%
BBE
44
0.55%
CCR
42
0.53%
F5H/CYP84A
40
0.5%
LAMT
39
0.49%
DFR
38
0.48%
PYKS
37
0.47%
NCS
35
0.44%
8HGO
28
0.35%
CYP51G1
28
0.35%
ANS/LDOX
26
0.33%
HMGR
26
0.33%
CPD/CYP90A1
25
0.32%
16OMT
22
0.28%
CCoAOMT
21
0.26%
HPPR
20
0.25%
CPR
20
0.25%
ISY
18
0.23%
ROT3/CYP90C1
18
0.23%
CYP80B1
15
0.19%
CYP719
15
0.19%
CNMT
14
0.18%
GGPPS
14
0.18%
CHS
13
0.16%
MVK
13
0.16%
PAL
12
0.15%
AACT
12
0.15%
MPO
11
0.14%
ODC
11
0.14%
SQS/FDFT1
9
0.11%
FPPS
9
0.11%
TYDC_DDC
8
0.1%
HDS/IspG
8
0.1%
DET2
7
0.09%
SMO1/SMO2
7
0.09%
MVD
7
0.09%
ADC
6
0.08%
DXS
6
0.08%
XMT_MXMT_DXMT
5
0.06%
6OMT_4OMT_SOMT
4
0.05%
CHI
4
0.05%
DXR
4
0.05%
CMK/IspE
4
0.05%
TDC
3
0.04%
CYP80F1
3
0.04%
DWF7
3
0.04%
IDI
3
0.04%
MCT/IspD
3
0.04%
PMK
3
0.04%
HDR/IspH
3
0.04%
FLS
2
0.03%
DWF1
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
GPPS
2
0.03%
FK
1
0.01%
CPI1
1
0.01%
MDS/IspF
1
0.01%
HMGS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1035 | 21 | UGT (446) | View species results |
| Alkaloid pathway | 759 | 25 | 7DLGT (199) | View species results |
| Phenylpropanoid pathway | 577 | 12 | POD (177) | View species results |
| Flavonoid pathway | 474 | 14 | UFGT (324) | View species results |
| Rosmarinic acid pathway | 315 | 7 | C4H (136) | View species results |
| Steroid pathway | 244 | 14 | CAS (101) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2980 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 534 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| RmulRmu_sc0005347.10386640.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0005363.10387180.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0005363.10387190.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0005856.10402910.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| RmulRmu_sc0005995.10407090.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0006020.10408230.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RmulRmu_sc0006263.10415690.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| RmulRmu_sc0006709.10428840.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| RmulRmu_sc0007025.10437760.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0007372.10446150.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RmulRmu_sc0007986.10460200.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RmulRmu_sc0008074.10462090.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RmulRmu_sc0008132.10463350.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0008132.10463370.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0008218.10465140.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RmulRmu_sc0009101.10481270.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0009101.10481280.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0009763.10492100.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RmulRmu_sc0010214.10498520.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RmulRmu_sc0011271.10512920.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| RmulRmu_sc0011520.10515130.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| RmulRmu_sc0011808.10518450.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0011808.10518470.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0011953.10519940.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| RmulRmu_sc0011953.10519960.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RmulRmu_sc0012503.10525980.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RmulRmu_sc0013571.10535100.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| RmulRmu_sc0015236.10547000.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| RmulRmu_sc0015959.10551230.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| RmulRmu_sc0019235.10568090.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0020992.10575370.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| RmulRmu_sc0021221.10576130.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0021560.10577680.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| RmulRmu_sc0022221.10579980.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0027914.10598130.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| RmulRmu_sc0028652.10600370.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| RmulRmu_sc0030558.10605100.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| RmulRmu_sc0032698.10610460.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0033786.10612960.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| RmulRmu_sc0036063.10618630.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| RmulRmu_sc0037230.10621370.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| RmulRmu_sc0041005.10629820.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RmulRmu_ssc0000047.10638170.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| RmulRmu_ssc0000150.10646200.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| RmulRmu_ssc0000157.10647020.v1.475 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| RmulRmu_ssc0000359.10662560.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RmulRmu_ssc0000359.10662620.v1.475 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| RmulRmu_co7959539.10000120.v1.475 | Phenylpropanoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| RmulRmu_co8002338.10003520.v1.475 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| RmulRmu_co8007472.10003990.v1.475 | Phenylpropanoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |