Rosa multiflora (rosa_multiflora)
Imported from atlas release summary for Rosa multiflora.
3404
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3404
Candidate Genes
C4H
6.6%
UGT
5.95%
C3'H/CYP98A
5.46%
BAHD
5.2%
7DLGT
4.93%
UFGT
4.47%
CYP76
3.72%
4CL
3.67%
Other Families
60.01%
More Families (98)
IFS
282
3.55%
T3O
240
3.02%
POD
204
2.57%
F3H
203
2.56%
BR6OX2/CYP85A2
160
2.02%
DWF4/CYP90B1
155
1.95%
F3'H/CYP75B
154
1.94%
NMT
148
1.86%
CAD
142
1.79%
H6H
128
1.61%
CODM/T6ODM
123
1.55%
CAS
122
1.54%
STR
107
1.35%
LAC
102
1.29%
SMT1/SMT2/SMT3
101
1.27%
CYP71
95
1.2%
TRI/TRII
89
1.12%
TPS
87
1.1%
GES
84
1.06%
GS
84
1.06%
HCT
76
0.96%
CSE
76
0.96%
G8O/G8H
70
0.88%
7DLH
69
0.87%
F3'5'H/CYP75A
67
0.84%
SLS
66
0.83%
CYP90D1
63
0.79%
T16H
60
0.76%
FNS
59
0.74%
TAT
59
0.74%
SQE
56
0.71%
IO
54
0.68%
IFR
53
0.67%
SGD
52
0.66%
COR
52
0.66%
COMT
52
0.66%
BR6OX1/CYP85A1
49
0.62%
PMT
47
0.59%
ANR
47
0.59%
RAS
45
0.57%
BBE
44
0.55%
CCR
42
0.53%
F5H/CYP84A
40
0.5%
LAMT
39
0.49%
DFR
38
0.48%
PYKS
37
0.47%
NCS
35
0.44%
8HGO
28
0.35%
CYP51G1
28
0.35%
ANS/LDOX
26
0.33%
HMGR
26
0.33%
CPD/CYP90A1
25
0.32%
16OMT
22
0.28%
CCoAOMT
21
0.26%
HPPR
20
0.25%
CPR
20
0.25%
ISY
18
0.23%
ROT3/CYP90C1
18
0.23%
CYP80B1
15
0.19%
CYP719
15
0.19%
CNMT
14
0.18%
GGPPS
14
0.18%
CHS
13
0.16%
MVK
13
0.16%
PAL
12
0.15%
AACT
12
0.15%
MPO
11
0.14%
ODC
11
0.14%
SQS/FDFT1
9
0.11%
FPPS
9
0.11%
TYDC_DDC
8
0.1%
HDS/IspG
8
0.1%
DET2
7
0.09%
SMO1/SMO2
7
0.09%
MVD
7
0.09%
ADC
6
0.08%
DXS
6
0.08%
XMT_MXMT_DXMT
5
0.06%
6OMT_4OMT_SOMT
4
0.05%
CHI
4
0.05%
DXR
4
0.05%
CMK/IspE
4
0.05%
TDC
3
0.04%
CYP80F1
3
0.04%
DWF7
3
0.04%
IDI
3
0.04%
MCT/IspD
3
0.04%
PMK
3
0.04%
HDR/IspH
3
0.04%
FLS
2
0.03%
DWF1
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
GPPS
2
0.03%
FK
1
0.01%
CPI1
1
0.01%
MDS/IspF
1
0.01%
HMGS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1035 | 21 | UGT (446) | View species results |
| Alkaloid pathway | 759 | 25 | 7DLGT (199) | View species results |
| Phenylpropanoid pathway | 577 | 12 | POD (177) | View species results |
| Flavonoid pathway | 474 | 14 | UFGT (324) | View species results |
| Rosmarinic acid pathway | 315 | 7 | C4H (136) | View species results |
| Steroid pathway | 244 | 14 | CAS (101) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2980 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 534 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| RmulRmu_co8015556.10004670.v1.475 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |
| RmulRmu_co8206472.10025570.v1.475 | Steroid | CAS | low | borderline | CAS__00007__sp_Q43153_CYSC_SPIOL |
| RmulRmu_co8249583.10031730.v1.475 | Steroid | CAS | medium | pass | CAS__00012__sp_Q9FN48_CAS_ARATH |
| RmulRmu_co8272705.10035380.v1.475 | Steroid | CAS | medium | pass | CAS__00010__sp_Q8W3Z3_CAS2_BETPL |
| RmulRmu_co8274513.10035740.v1.475 | Steroid | CAS | medium | pass | CAS__00002__sp_E2IUB0_CASS_KALDA |
| RmulRmu_co8286409.10037950.v1.475 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |
| RmulRmu_co8308753.10041930.v1.475 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |
| RmulRmu_co8352379.10050480.v1.475 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| RmulRmu_co8434809.10067320.v1.475 | Steroid | CAS | medium | pass | CAS__00011__sp_Q8W3Z4_CAS1_BETPL |
| RmulRmu_co8462617.10073200.v1.475 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0000048.10088120.v1.475 | Steroid | CAS | medium | pass | CAS__00002__sp_E2IUB0_CASS_KALDA |
| RmulRmu_sc0000048.10088200.v1.475 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| RmulRmu_sc0000048.10088210.v1.475 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| RmulRmu_sc0000048.10088220.v1.475 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| RmulRmu_sc0000208.10100730.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0000394.10117340.v1.475 | Steroid | CAS | medium | pass | CAS__00009__sp_Q6Z2X6_CAS_ORYSJ |
| RmulRmu_sc0000535.10128220.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0000535.10128240.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0000613.10136240.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0000674.10140120.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0000824.10151910.v1.475 | Steroid | CAS | medium | pass | CAS__00008__sp_Q6BE25_CAS1_CUCPE |
| RmulRmu_sc0000824.10151920.v1.475 | Steroid | CAS | medium | pass | CAS__00013__sp_Q9SLP9_CAS1_LUFAE |
| RmulRmu_sc0001145.10173250.v1.475 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| RmulRmu_sc0001200.10177320.v1.475 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| RmulRmu_sc0001217.10179240.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0001217.10179270.v1.475 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0001353.10187120.v1.475 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0001353.10187140.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0001353.10187220.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0001397.10190120.v1.475 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| RmulRmu_sc0001468.10193790.v1.475 | Steroid | CAS | medium | pass | CAS__00008__sp_Q6BE25_CAS1_CUCPE |
| RmulRmu_sc0001468.10193840.v1.475 | Steroid | CAS | low | borderline | CAS__00009__sp_Q6Z2X6_CAS_ORYSJ |
| RmulRmu_sc0001548.10198650.v1.475 | Steroid | CAS | low | borderline | CAS__00002__sp_E2IUB0_CASS_KALDA |
| RmulRmu_sc0001548.10198710.v1.475 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| RmulRmu_sc0001548.10198790.v1.475 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| RmulRmu_sc0001577.10200880.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0001644.10204750.v1.475 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| RmulRmu_sc0001796.10215890.v1.475 | Steroid | CAS | medium | pass | CAS__00010__sp_Q8W3Z3_CAS2_BETPL |
| RmulRmu_sc0001998.10227550.v1.475 | Steroid | CAS | medium | pass | CAS__00009__sp_Q6Z2X6_CAS_ORYSJ |
| RmulRmu_sc0002070.10231950.v1.475 | Steroid | CAS | medium | pass | CAS__00008__sp_Q6BE25_CAS1_CUCPE |
| RmulRmu_sc0002070.10231960.v1.475 | Steroid | CAS | medium | pass | CAS__00009__sp_Q6Z2X6_CAS_ORYSJ |
| RmulRmu_sc0002070.10231980.v1.475 | Steroid | CAS | medium | pass | CAS__00009__sp_Q6Z2X6_CAS_ORYSJ |
| RmulRmu_sc0002082.10233070.v1.475 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| RmulRmu_sc0002116.10235040.v1.475 | Steroid | CAS | medium | pass | CAS__00011__sp_Q8W3Z4_CAS1_BETPL |
| RmulRmu_sc0002210.10241050.v1.475 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0002210.10241060.v1.475 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0002281.10245960.v1.475 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| RmulRmu_sc0002312.10248380.v1.475 | Steroid | CAS | medium | pass | CAS__00010__sp_Q8W3Z3_CAS2_BETPL |
| RmulRmu_sc0002349.10250670.v1.475 | Steroid | CAS | low | borderline | CAS__00004__sp_O82139_CAS1_PANGI |
| RmulRmu_sc0002453.10256150.v1.475 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |