Rosa multiflora (rosa_multiflora)
Imported from atlas release summary for Rosa multiflora.
3404
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3404
Candidate Genes
C4H
6.6%
UGT
5.95%
C3'H/CYP98A
5.46%
BAHD
5.2%
7DLGT
4.93%
UFGT
4.47%
CYP76
3.72%
4CL
3.67%
Other Families
60.01%
More Families (98)
IFS
282
3.55%
T3O
240
3.02%
POD
204
2.57%
F3H
203
2.56%
BR6OX2/CYP85A2
160
2.02%
DWF4/CYP90B1
155
1.95%
F3'H/CYP75B
154
1.94%
NMT
148
1.86%
CAD
142
1.79%
H6H
128
1.61%
CODM/T6ODM
123
1.55%
CAS
122
1.54%
STR
107
1.35%
LAC
102
1.29%
SMT1/SMT2/SMT3
101
1.27%
CYP71
95
1.2%
TRI/TRII
89
1.12%
TPS
87
1.1%
GES
84
1.06%
GS
84
1.06%
HCT
76
0.96%
CSE
76
0.96%
G8O/G8H
70
0.88%
7DLH
69
0.87%
F3'5'H/CYP75A
67
0.84%
SLS
66
0.83%
CYP90D1
63
0.79%
T16H
60
0.76%
FNS
59
0.74%
TAT
59
0.74%
SQE
56
0.71%
IO
54
0.68%
IFR
53
0.67%
SGD
52
0.66%
COR
52
0.66%
COMT
52
0.66%
BR6OX1/CYP85A1
49
0.62%
PMT
47
0.59%
ANR
47
0.59%
RAS
45
0.57%
BBE
44
0.55%
CCR
42
0.53%
F5H/CYP84A
40
0.5%
LAMT
39
0.49%
DFR
38
0.48%
PYKS
37
0.47%
NCS
35
0.44%
8HGO
28
0.35%
CYP51G1
28
0.35%
ANS/LDOX
26
0.33%
HMGR
26
0.33%
CPD/CYP90A1
25
0.32%
16OMT
22
0.28%
CCoAOMT
21
0.26%
HPPR
20
0.25%
CPR
20
0.25%
ISY
18
0.23%
ROT3/CYP90C1
18
0.23%
CYP80B1
15
0.19%
CYP719
15
0.19%
CNMT
14
0.18%
GGPPS
14
0.18%
CHS
13
0.16%
MVK
13
0.16%
PAL
12
0.15%
AACT
12
0.15%
MPO
11
0.14%
ODC
11
0.14%
SQS/FDFT1
9
0.11%
FPPS
9
0.11%
TYDC_DDC
8
0.1%
HDS/IspG
8
0.1%
DET2
7
0.09%
SMO1/SMO2
7
0.09%
MVD
7
0.09%
ADC
6
0.08%
DXS
6
0.08%
XMT_MXMT_DXMT
5
0.06%
6OMT_4OMT_SOMT
4
0.05%
CHI
4
0.05%
DXR
4
0.05%
CMK/IspE
4
0.05%
TDC
3
0.04%
CYP80F1
3
0.04%
DWF7
3
0.04%
IDI
3
0.04%
MCT/IspD
3
0.04%
PMK
3
0.04%
HDR/IspH
3
0.04%
FLS
2
0.03%
DWF1
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
GPPS
2
0.03%
FK
1
0.01%
CPI1
1
0.01%
MDS/IspF
1
0.01%
HMGS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1035 | 21 | UGT (446) | View species results |
| Alkaloid pathway | 759 | 25 | 7DLGT (199) | View species results |
| Phenylpropanoid pathway | 577 | 12 | POD (177) | View species results |
| Flavonoid pathway | 474 | 14 | UFGT (324) | View species results |
| Rosmarinic acid pathway | 315 | 7 | C4H (136) | View species results |
| Steroid pathway | 244 | 14 | CAS (101) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2980 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 534 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| RmulRmu_sc0010073.10496710.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| RmulRmu_sc0010076.10496770.v1.475 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| RmulRmu_sc0010235.10498770.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| RmulRmu_sc0010280.10499540.v1.475 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| RmulRmu_sc0010364.10500680.v1.475 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| RmulRmu_sc0010379.10501010.v1.475 | Alkaloid | NMT | low | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| RmulRmu_sc0011132.10511100.v1.475 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| RmulRmu_sc0011132.10511110.v1.475 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| RmulRmu_sc0011904.10519130.v1.475 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| RmulRmu_sc0012347.10524380.v1.475 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| RmulRmu_sc0013112.10531210.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| RmulRmu_sc0013245.10532340.v1.475 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| RmulRmu_sc0014071.10539410.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| RmulRmu_sc0014667.10543760.v1.475 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| RmulRmu_sc0017023.10557020.v1.475 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| RmulRmu_sc0017747.10560850.v1.475 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| RmulRmu_sc0019006.10567100.v1.475 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| RmulRmu_sc0019190.10567970.v1.475 | Alkaloid | NMT | low | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| RmulRmu_sc0019356.10568790.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| RmulRmu_sc0019478.10569340.v1.475 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| RmulRmu_sc0020855.10574850.v1.475 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| RmulRmu_sc0023402.10584220.v1.475 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| RmulRmu_sc0023962.10586320.v1.475 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| RmulRmu_sc0024226.10587270.v1.475 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| RmulRmu_sc0025254.10590480.v1.475 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| RmulRmu_sc0025685.10591590.v1.475 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| RmulRmu_sc0026342.10593420.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| RmulRmu_sc0026969.10595070.v1.475 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| RmulRmu_sc0028838.10600790.v1.475 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| RmulRmu_sc0031310.10606970.v1.475 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| RmulRmu_sc0031621.10607690.v1.475 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| RmulRmu_sc0032096.10608850.v1.475 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| RmulRmu_sc0033149.10611390.v1.475 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| RmulRmu_sc0033384.10611890.v1.475 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| RmulRmu_sc0034285.10614260.v1.475 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| RmulRmu_sc0035117.10616360.v1.475 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| RmulRmu_sc0036661.10620260.v1.475 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| RmulRmu_sc0038028.10623090.v1.475 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| RmulRmu_ssc0000009.10635440.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| RmulRmu_ssc0000114.10642730.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| RmulRmu_ssc0000192.10650080.v1.475 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| RmulRmu_ssc0000234.10653630.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| RmulRmu_ssc0000279.10657440.v1.475 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| RmulRmu_ssc0000316.10659970.v1.475 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| RmulRmu_ssc0000358.10662410.v1.475 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| RmulRmu_ssc0000418.10667750.v1.475 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| RmulRmu_ssc0000424.10668800.v1.475 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| RmulRmu_ssc0000452.10671110.v1.475 | Alkaloid | NMT | medium | borderline | NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB |