Rosa multiflora (rosa_multiflora)
Imported from atlas release summary for Rosa multiflora.
3404
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3404
Candidate Genes
C4H
6.6%
UGT
5.95%
C3'H/CYP98A
5.46%
BAHD
5.2%
7DLGT
4.93%
UFGT
4.47%
CYP76
3.72%
4CL
3.67%
Other Families
60.01%
More Families (98)
IFS
282
3.55%
T3O
240
3.02%
POD
204
2.57%
F3H
203
2.56%
BR6OX2/CYP85A2
160
2.02%
DWF4/CYP90B1
155
1.95%
F3'H/CYP75B
154
1.94%
NMT
148
1.86%
CAD
142
1.79%
H6H
128
1.61%
CODM/T6ODM
123
1.55%
CAS
122
1.54%
STR
107
1.35%
LAC
102
1.29%
SMT1/SMT2/SMT3
101
1.27%
CYP71
95
1.2%
TRI/TRII
89
1.12%
TPS
87
1.1%
GES
84
1.06%
GS
84
1.06%
HCT
76
0.96%
CSE
76
0.96%
G8O/G8H
70
0.88%
7DLH
69
0.87%
F3'5'H/CYP75A
67
0.84%
SLS
66
0.83%
CYP90D1
63
0.79%
T16H
60
0.76%
FNS
59
0.74%
TAT
59
0.74%
SQE
56
0.71%
IO
54
0.68%
IFR
53
0.67%
SGD
52
0.66%
COR
52
0.66%
COMT
52
0.66%
BR6OX1/CYP85A1
49
0.62%
PMT
47
0.59%
ANR
47
0.59%
RAS
45
0.57%
BBE
44
0.55%
CCR
42
0.53%
F5H/CYP84A
40
0.5%
LAMT
39
0.49%
DFR
38
0.48%
PYKS
37
0.47%
NCS
35
0.44%
8HGO
28
0.35%
CYP51G1
28
0.35%
ANS/LDOX
26
0.33%
HMGR
26
0.33%
CPD/CYP90A1
25
0.32%
16OMT
22
0.28%
CCoAOMT
21
0.26%
HPPR
20
0.25%
CPR
20
0.25%
ISY
18
0.23%
ROT3/CYP90C1
18
0.23%
CYP80B1
15
0.19%
CYP719
15
0.19%
CNMT
14
0.18%
GGPPS
14
0.18%
CHS
13
0.16%
MVK
13
0.16%
PAL
12
0.15%
AACT
12
0.15%
MPO
11
0.14%
ODC
11
0.14%
SQS/FDFT1
9
0.11%
FPPS
9
0.11%
TYDC_DDC
8
0.1%
HDS/IspG
8
0.1%
DET2
7
0.09%
SMO1/SMO2
7
0.09%
MVD
7
0.09%
ADC
6
0.08%
DXS
6
0.08%
XMT_MXMT_DXMT
5
0.06%
6OMT_4OMT_SOMT
4
0.05%
CHI
4
0.05%
DXR
4
0.05%
CMK/IspE
4
0.05%
TDC
3
0.04%
CYP80F1
3
0.04%
DWF7
3
0.04%
IDI
3
0.04%
MCT/IspD
3
0.04%
PMK
3
0.04%
HDR/IspH
3
0.04%
FLS
2
0.03%
DWF1
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
GPPS
2
0.03%
FK
1
0.01%
CPI1
1
0.01%
MDS/IspF
1
0.01%
HMGS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1035 | 21 | UGT (446) | View species results |
| Alkaloid pathway | 759 | 25 | 7DLGT (199) | View species results |
| Phenylpropanoid pathway | 577 | 12 | POD (177) | View species results |
| Flavonoid pathway | 474 | 14 | UFGT (324) | View species results |
| Rosmarinic acid pathway | 315 | 7 | C4H (136) | View species results |
| Steroid pathway | 244 | 14 | CAS (101) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2980 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 534 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| RmulRmu_sc0005898.10403980.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0005980.10406750.v1.475 | Alkaloid | T3O | low | borderline |
| RmulRmu_sc0006020.10408220.v1.475 | Alkaloid | T3O | low | borderline |
| RmulRmu_sc0006098.10410570.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0006151.10411740.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0006213.10413670.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0006263.10415600.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0006266.10415920.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0006266.10415940.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0006420.10420340.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0006493.10422640.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0006634.10426780.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0006637.10426820.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0006968.10436570.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0006976.10436660.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0007079.10439230.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0007106.10439830.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0007137.10440940.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0007192.10442030.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0007192.10442050.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0007276.10443690.v1.475 | Alkaloid | T3O | low | borderline |
| RmulRmu_sc0007742.10454450.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0008148.10463750.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0008148.10463780.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0008148.10463800.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0008602.10472780.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0008611.10472910.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0008633.10473360.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0008769.10476090.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0008864.10477570.v1.475 | Alkaloid | T3O | medium | pass |
| RmulRmu_sc0009042.10480380.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0009050.10480680.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0009082.10481060.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0009186.10482620.v1.475 | Alkaloid | T3O | low | borderline |
| RmulRmu_sc0009227.10483320.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0009324.10484840.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0009481.10487930.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0009499.10488280.v1.475 | Alkaloid | T3O | low | borderline |
| RmulRmu_sc0011009.10509370.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0011792.10518240.v1.475 | Alkaloid | T3O | low | borderline |
| RmulRmu_sc0012005.10520810.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0012276.10523450.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0012276.10523490.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0012276.10523500.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0012331.10524130.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0012331.10524140.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0012331.10524150.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0013563.10535020.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0013612.10535680.v1.475 | Alkaloid | T3O | medium | borderline |
| RmulRmu_sc0013864.10537610.v1.475 | Alkaloid | T3O | medium | borderline |