PlantSME Plant secondary metabolism enzyme database

Rosa rugosa (rosa_rugosa)

Imported from atlas release summary for Rosa rugosa.

2079
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 587 18 UGT (243) View species results
Alkaloid pathway 492 21 7DLGT (134) View species results
Phenylpropanoid pathway 398 11 POD (135) View species results
Flavonoid pathway 293 9 UFGT (234) View species results
Rosmarinic acid pathway 168 7 C4H (73) View species results
Steroid pathway 141 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Rrug01G0037420.1 Alkaloid SLS medium borderline
Rrug02G0010830.1 Alkaloid SLS medium borderline
Rrug02G0010840.1 Alkaloid SLS medium borderline
Rrug02G0010850.1 Alkaloid SLS low borderline
Rrug02G0044970.1 Alkaloid SLS medium borderline
Rrug03G0021190.1 Alkaloid SLS medium borderline
Rrug03G0026350.1 Alkaloid SLS medium borderline
Rrug03G0026360.1 Alkaloid SLS medium borderline
Rrug03G0026380.1 Alkaloid SLS medium borderline
Rrug03G0026390.1 Alkaloid SLS medium borderline
Rrug03G0026400.1 Alkaloid SLS medium borderline
Rrug03G0026410.1 Alkaloid SLS medium borderline
Rrug03G0026430.1 Alkaloid SLS medium borderline
Rrug03G0032640.1 Alkaloid SLS medium borderline
Rrug03G0043210.1 Alkaloid SLS medium borderline
Rrug03G0043230.1 Alkaloid SLS medium borderline
Rrug03G0045020.1 Alkaloid SLS medium borderline
Rrug03G0045050.1 Alkaloid SLS medium borderline
Rrug03G0045080.1 Alkaloid SLS medium borderline
Rrug03G0045090.1 Alkaloid SLS medium borderline
Rrug03G0045110.1 Alkaloid SLS medium borderline
Rrug03G0045150.1 Alkaloid SLS medium borderline
Rrug03G0046600.1 Alkaloid SLS medium borderline
Rrug04G0010140.1 Alkaloid SLS medium borderline
Rrug04G0010150.1 Alkaloid SLS medium borderline
Rrug04G0010240.1 Alkaloid SLS medium borderline
Rrug05G0034480.1 Alkaloid SLS medium borderline
Rrug05G0047500.1 Alkaloid SLS medium borderline
Rrug05G0047550.1 Alkaloid SLS medium borderline
Rrug05G0047590.1 Alkaloid SLS medium borderline
Rrug06G0004480.1 Alkaloid SLS medium borderline
Rrug06G0009440.1 Alkaloid SLS medium borderline
Rrug06G0011560.1 Alkaloid SLS medium borderline
Rrug06G0028840.1 Alkaloid SLS medium borderline
Rrug06G0045030.1 Alkaloid SLS medium borderline
Rrug06G0053040.1 Alkaloid SLS medium borderline
Rrug06G0057020.1 Alkaloid SLS medium borderline
Rrug06G0060190.1 Alkaloid SLS medium borderline
Rrug07G0001150.1 Alkaloid SLS medium borderline
Rrug07G0022530.1 Alkaloid SLS medium borderline