PlantSME Plant secondary metabolism enzyme database

Rosa rugosa (rosa_rugosa)

Imported from atlas release summary for Rosa rugosa.

2079
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 587 18 UGT (243) View species results
Alkaloid pathway 492 21 7DLGT (134) View species results
Phenylpropanoid pathway 398 11 POD (135) View species results
Flavonoid pathway 293 9 UFGT (234) View species results
Rosmarinic acid pathway 168 7 C4H (73) View species results
Steroid pathway 141 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Rrug01G0016470.1 Rosmarinic Acid 4CL low borderline
Rrug01G0016530.1 Rosmarinic Acid 4CL low borderline
Rrug01G0016600.1 Rosmarinic Acid 4CL low borderline
Rrug01G0020040.1 Rosmarinic Acid 4CL low borderline
Rrug01G0026060.1 Rosmarinic Acid 4CL medium pass
Rrug01G0031220.1 Rosmarinic Acid 4CL medium pass
Rrug01G0031940.1 Rosmarinic Acid 4CL medium pass
Rrug02G0007830.1 Rosmarinic Acid 4CL medium pass
Rrug02G0015470.1 Rosmarinic Acid 4CL low borderline
Rrug02G0036990.1 Rosmarinic Acid 4CL medium pass
Rrug02G0043430.1 Rosmarinic Acid 4CL medium pass
Rrug02G0048680.1 Rosmarinic Acid 4CL low borderline
Rrug02G0048770.1 Rosmarinic Acid 4CL low borderline
Rrug03G0016190.1 Rosmarinic Acid 4CL low borderline
Rrug03G0016680.1 Rosmarinic Acid 4CL low borderline
Rrug03G0051190.1 Rosmarinic Acid 4CL medium pass
Rrug04G0001590.1 Rosmarinic Acid 4CL medium pass
Rrug04G0006090.1 Rosmarinic Acid 4CL low borderline
Rrug04G0025860.1 Rosmarinic Acid 4CL medium pass
Rrug04G0033100.1 Rosmarinic Acid 4CL low borderline
Rrug04G0033120.1 Rosmarinic Acid 4CL low borderline
Rrug04G0033690.1 Rosmarinic Acid 4CL medium pass
Rrug04G0033710.1 Rosmarinic Acid 4CL medium pass
Rrug04G0034150.1 Rosmarinic Acid 4CL medium pass
Rrug04G0034780.1 Rosmarinic Acid 4CL medium pass
Rrug04G0034790.1 Rosmarinic Acid 4CL medium pass
Rrug05G0025190.1 Rosmarinic Acid 4CL medium pass
Rrug05G0025200.1 Rosmarinic Acid 4CL medium pass
Rrug05G0056870.1 Rosmarinic Acid 4CL low borderline
Rrug06G0012120.1 Rosmarinic Acid 4CL medium pass
Rrug06G0012150.1 Rosmarinic Acid 4CL medium pass
Rrug06G0034370.1 Rosmarinic Acid 4CL medium pass
Rrug06G0042270.1 Rosmarinic Acid 4CL low borderline
Rrug06G0047590.1 Rosmarinic Acid 4CL medium pass
Rrug06G0054500.1 Rosmarinic Acid 4CL low borderline
Rrug06G0054520.1 Rosmarinic Acid 4CL low borderline
Rrug06G0070750.1 Rosmarinic Acid 4CL low borderline
Rrug07G0011190.1 Rosmarinic Acid 4CL medium pass
Rrug07G0014690.1 Rosmarinic Acid 4CL low borderline
Rrug07G0017630.1 Rosmarinic Acid 4CL medium pass
Rrug07G0029220.1 Rosmarinic Acid 4CL medium pass
Rrug01G0010010.1 Rosmarinic Acid C4H low borderline
Rrug01G0015220.1 Rosmarinic Acid C4H low borderline
Rrug01G0015250.1 Rosmarinic Acid C4H medium pass
Rrug01G0016910.1 Rosmarinic Acid C4H low borderline
Rrug01G0021830.1 Rosmarinic Acid C4H medium pass
Rrug01G0021880.1 Rosmarinic Acid C4H medium pass
Rrug01G0023090.1 Rosmarinic Acid C4H low borderline
Rrug01G0023550.1 Rosmarinic Acid C4H low borderline
Rrug01G0024060.1 Rosmarinic Acid C4H medium pass