PlantSME Plant secondary metabolism enzyme database

Rosa rugosa (rosa_rugosa)

Imported from atlas release summary for Rosa rugosa.

2079
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 587 18 UGT (243) View species results
Alkaloid pathway 492 21 7DLGT (134) View species results
Phenylpropanoid pathway 398 11 POD (135) View species results
Flavonoid pathway 293 9 UFGT (234) View species results
Rosmarinic acid pathway 168 7 C4H (73) View species results
Steroid pathway 141 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Rrug03G0002870.1 Flavonoid ANR medium borderline
Rrug03G0002910.1 Flavonoid ANR high pass
Rrug03G0002930.1 Flavonoid ANR medium borderline
Rrug03G0002980.1 Flavonoid ANR medium borderline
Rrug03G0003050.1 Flavonoid ANR medium borderline
Rrug03G0003070.1 Flavonoid ANR medium borderline
Rrug03G0017660.1 Flavonoid ANR medium borderline
Rrug03G0017740.1 Flavonoid ANR medium borderline
Rrug03G0025680.1 Flavonoid ANR medium borderline
Rrug03G0025690.1 Flavonoid ANR medium borderline
Rrug03G0025720.1 Flavonoid ANR medium borderline
Rrug03G0025750.1 Flavonoid ANR medium borderline
Rrug03G0025770.1 Flavonoid ANR medium borderline
Rrug03G0031850.1 Flavonoid ANR medium borderline
Rrug04G0037690.1 Flavonoid ANR low borderline
Rrug05G0009640.1 Flavonoid ANR medium borderline
Rrug05G0029580.1 Flavonoid ANR medium borderline
Rrug05G0041600.1 Flavonoid ANR medium borderline
Rrug05G0066310.1 Flavonoid ANR medium borderline
Rrug05G0070400.1 Flavonoid ANR medium borderline
Rrug06G0037400.1 Flavonoid ANR medium borderline
Rrug06G0067010.1 Flavonoid ANR low borderline
Rrug07G0014960.1 Flavonoid ANR low borderline
Rrug07G0014970.1 Flavonoid ANR high pass
Rrug07G0032460.1 Flavonoid ANR medium borderline
Rrug07G0033600.1 Flavonoid ANR medium borderline
Rrug01G0008940.1 Flavonoid ANS/LDOX medium borderline
Rrug01G0037020.1 Flavonoid ANS/LDOX low borderline
Rrug02G0023040.1 Flavonoid ANS/LDOX medium borderline
Rrug03G0018180.1 Flavonoid ANS/LDOX medium borderline
Rrug04G0015120.1 Flavonoid ANS/LDOX medium borderline
Rrug04G0015150.1 Flavonoid ANS/LDOX medium borderline
Rrug04G0015170.1 Flavonoid ANS/LDOX medium borderline
Rrug05G0048490.1 Flavonoid ANS/LDOX medium borderline
Rrug05G0054530.1 Flavonoid ANS/LDOX medium borderline
Rrug05G0059940.1 Flavonoid ANS/LDOX medium borderline
Rrug01G0023550.1 Flavonoid C4H low borderline
Rrug01G0037420.1 Flavonoid C4H medium borderline
Rrug01G0037530.1 Flavonoid C4H medium borderline
Rrug01G0037550.1 Flavonoid C4H medium borderline
Rrug01G0037570.1 Flavonoid C4H medium borderline
Rrug01G0037600.1 Flavonoid C4H medium borderline
Rrug03G0017520.1 Flavonoid C4H medium borderline
Rrug05G0007830.1 Flavonoid C4H medium borderline
Rrug05G0023190.1 Flavonoid C4H medium borderline
Rrug03G0037200.1 Flavonoid CHI medium pass
Rrug01G0014410.1 Flavonoid CHS medium pass
Rrug01G0014750.1 Flavonoid CHS medium pass
Rrug02G0059380.1 Flavonoid CHS medium pass
Rrug03G0002370.1 Flavonoid CHS medium pass