PlantSME Plant secondary metabolism enzyme database

Rosa rugosa (rosa_rugosa)

Imported from atlas release summary for Rosa rugosa.

2079
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 587 18 UGT (243) View species results
Alkaloid pathway 492 21 7DLGT (134) View species results
Phenylpropanoid pathway 398 11 POD (135) View species results
Flavonoid pathway 293 9 UFGT (234) View species results
Rosmarinic acid pathway 168 7 C4H (73) View species results
Steroid pathway 141 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Rrug02G0032420.1 Rosmarinic Acid C4H low borderline
Rrug02G0032520.1 Rosmarinic Acid C4H medium pass
Rrug02G0036080.1 Rosmarinic Acid C4H low borderline
Rrug02G0037310.1 Rosmarinic Acid C4H medium pass
Rrug02G0038100.1 Rosmarinic Acid C4H medium pass
Rrug02G0040300.1 Rosmarinic Acid C4H low borderline
Rrug02G0043870.1 Rosmarinic Acid C4H medium pass
Rrug02G0044950.1 Rosmarinic Acid C4H low borderline
Rrug02G0044970.1 Rosmarinic Acid C4H low borderline
Rrug02G0052110.1 Rosmarinic Acid C4H low borderline
Rrug03G0001150.1 Rosmarinic Acid C4H medium pass
Rrug03G0001200.1 Rosmarinic Acid C4H low borderline
Rrug03G0003850.1 Rosmarinic Acid C4H low borderline
Rrug03G0008170.1 Rosmarinic Acid C4H low borderline
Rrug03G0008400.1 Rosmarinic Acid C4H low borderline
Rrug03G0008480.1 Rosmarinic Acid C4H medium pass
Rrug03G0009800.1 Rosmarinic Acid C4H low borderline
Rrug03G0010990.1 Rosmarinic Acid C4H low borderline
Rrug03G0015570.1 Rosmarinic Acid C4H medium pass
Rrug03G0015600.1 Rosmarinic Acid C4H low borderline
Rrug03G0017520.1 Rosmarinic Acid C4H low borderline
Rrug03G0018950.1 Rosmarinic Acid C4H low borderline
Rrug03G0018970.1 Rosmarinic Acid C4H low borderline
Rrug03G0021160.1 Rosmarinic Acid C4H low borderline
Rrug03G0021190.1 Rosmarinic Acid C4H low borderline
Rrug03G0021200.1 Rosmarinic Acid C4H low borderline
Rrug03G0021350.1 Rosmarinic Acid C4H low borderline
Rrug03G0021500.1 Rosmarinic Acid C4H medium pass
Rrug03G0026310.1 Rosmarinic Acid C4H low borderline
Rrug03G0026350.1 Rosmarinic Acid C4H low borderline
Rrug03G0026360.1 Rosmarinic Acid C4H low borderline
Rrug03G0026380.1 Rosmarinic Acid C4H low borderline
Rrug03G0026390.1 Rosmarinic Acid C4H low borderline
Rrug03G0026400.1 Rosmarinic Acid C4H low borderline
Rrug03G0026410.1 Rosmarinic Acid C4H low borderline
Rrug03G0026430.1 Rosmarinic Acid C4H low borderline
Rrug03G0027410.1 Rosmarinic Acid C4H medium pass
Rrug03G0027450.1 Rosmarinic Acid C4H low borderline
Rrug03G0029450.1 Rosmarinic Acid C4H low borderline
Rrug03G0032370.1 Rosmarinic Acid C4H medium pass
Rrug03G0032420.1 Rosmarinic Acid C4H low borderline
Rrug03G0032430.1 Rosmarinic Acid C4H low borderline
Rrug03G0032460.1 Rosmarinic Acid C4H low borderline
Rrug03G0032530.1 Rosmarinic Acid C4H low borderline
Rrug03G0032550.1 Rosmarinic Acid C4H medium pass
Rrug03G0032640.1 Rosmarinic Acid C4H low borderline
Rrug03G0032650.1 Rosmarinic Acid C4H low borderline
Rrug03G0032660.1 Rosmarinic Acid C4H low borderline
Rrug03G0033380.1 Rosmarinic Acid C4H low borderline
Rrug03G0040990.1 Rosmarinic Acid C4H low borderline