PlantSME Plant secondary metabolism enzyme database

Rosa rugosa (rosa_rugosa)

Imported from atlas release summary for Rosa rugosa.

2079
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 587 18 UGT (243) View species results
Alkaloid pathway 492 21 7DLGT (134) View species results
Phenylpropanoid pathway 398 11 POD (135) View species results
Flavonoid pathway 293 9 UFGT (234) View species results
Rosmarinic acid pathway 168 7 C4H (73) View species results
Steroid pathway 141 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Rrug05G0055980.1 Alkaloid BBE medium borderline
Rrug05G0056050.1 Alkaloid BBE medium borderline
Rrug05G0056070.1 Alkaloid BBE medium borderline
Rrug05G0056080.1 Alkaloid BBE medium borderline
Rrug05G0056090.1 Alkaloid BBE medium borderline
Rrug05G0056120.1 Alkaloid BBE medium borderline
Rrug05G0056160.1 Alkaloid BBE medium borderline
Rrug05G0056170.1 Alkaloid BBE medium borderline
Rrug05G0056180.1 Alkaloid BBE medium borderline
Rrug05G0056200.1 Alkaloid BBE medium borderline
Rrug05G0056210.1 Alkaloid BBE medium borderline
Rrug01G0002990.1 Alkaloid CNMT low borderline
Rrug01G0003000.1 Alkaloid CNMT medium pass
Rrug01G0039190.1 Alkaloid CNMT low borderline
Rrug02G0001570.1 Alkaloid CNMT medium borderline
Rrug02G0048480.1 Alkaloid CNMT low borderline
Rrug03G0019410.1 Alkaloid CNMT low borderline
Rrug03G0019610.1 Alkaloid CNMT low borderline
Rrug03G0034750.1 Alkaloid CNMT medium pass
Rrug04G0012840.1 Alkaloid CNMT low borderline
Rrug04G0038250.1 Alkaloid CNMT low borderline
Rrug06G0050680.1 Alkaloid CNMT low borderline
Rrug06G0061030.1 Alkaloid CNMT low borderline
Rrug07G0009580.1 Alkaloid CNMT low borderline
Rrug07G0034900.1 Alkaloid CNMT low borderline
Rrug01G0004830.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0004920.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0004970.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0005000.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0005030.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0023720.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0027720.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0042510.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0042520.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0042530.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0042540.1 Alkaloid CODM/T6ODM medium borderline
Rrug01G0045380.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0000790.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0015660.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0015930.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0023040.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0024620.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0024660.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0024870.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0034240.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0040540.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0040600.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0049560.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0049570.1 Alkaloid CODM/T6ODM medium borderline
Rrug02G0049590.1 Alkaloid CODM/T6ODM medium borderline