Salix brachista (salix_brachista)
Imported from atlas release summary for Salix brachista.
1464
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1464
Candidate Genes
C4H
7.21%
BAHD
6.54%
UGT
4.82%
C3'H/CYP98A
4.3%
7DLGT
3.96%
4CL
3.58%
POD
3.46%
F3H
3.35%
Other Families
62.78%
More Families (97)
IFS
115
3.19%
CYP76
111
3.08%
UFGT
104
2.88%
T3O
92
2.55%
NMT
80
2.22%
STR
72
2.0%
F3'H/CYP75B
66
1.83%
CAD
64
1.77%
H6H
63
1.75%
CODM/T6ODM
61
1.69%
TRI/TRII
53
1.47%
LAC
53
1.47%
CAS
53
1.47%
G8O/G8H
50
1.39%
BR6OX2/CYP85A2
50
1.39%
DWF4/CYP90B1
50
1.39%
HCT
48
1.33%
T16H
42
1.16%
SMT1/SMT2/SMT3
42
1.16%
IFR
41
1.14%
FNS
40
1.11%
TAT
40
1.11%
CYP71
40
1.11%
PYKS
37
1.03%
GS
35
0.97%
RAS
34
0.94%
SGD
32
0.89%
CYP90D1
31
0.86%
COMT
30
0.83%
CCR
28
0.78%
TPS
28
0.78%
GES
27
0.75%
CSE
27
0.75%
SLS
25
0.69%
PMT
24
0.67%
8HGO
24
0.67%
F3'5'H/CYP75A
24
0.67%
IO
23
0.64%
NCS
23
0.64%
F5H/CYP84A
23
0.64%
16OMT
20
0.55%
ANR
20
0.55%
LAMT
19
0.53%
DFR
19
0.53%
PAL
18
0.5%
CPD/CYP90A1
14
0.39%
ISY
12
0.33%
BR6OX1/CYP85A1
12
0.33%
AACT
12
0.33%
7DLH
11
0.3%
SQS/FDFT1
11
0.3%
CHS
10
0.28%
MPO
9
0.25%
CYP80B1
9
0.25%
ANS/LDOX
9
0.25%
COR
8
0.22%
SQE
8
0.22%
CPR
7
0.19%
DET2
7
0.19%
HMGR
7
0.19%
GGPPS
7
0.19%
CHI
6
0.17%
CCoAOMT
6
0.17%
CYP51G1
6
0.17%
ROT3/CYP90C1
6
0.17%
MVK
6
0.17%
CNMT
5
0.14%
HPPR
5
0.14%
SMO1/SMO2
5
0.14%
FPPS
5
0.14%
DXS
5
0.14%
MVD
5
0.14%
TDC
4
0.11%
CYP719
4
0.11%
XMT_MXMT_DXMT
4
0.11%
DWF1
4
0.11%
PMK
3
0.08%
MCT/IspD
3
0.08%
CYP80F1
2
0.06%
ODC
2
0.06%
TYDC_DDC
2
0.06%
HYD1
2
0.06%
DWF7
2
0.06%
MDS/IspF
2
0.06%
HMGS
2
0.06%
HDS/IspG
2
0.06%
CMK/IspE
2
0.06%
DXR
2
0.06%
ADC
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
BBE
1
0.03%
FLS
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
CPI1
1
0.03%
HDR/IspH
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 448 | 19 | BAHD (172) | View species results |
| Alkaloid pathway | 346 | 23 | 7DLGT (67) | View species results |
| Phenylpropanoid pathway | 287 | 12 | POD (106) | View species results |
| Flavonoid pathway | 173 | 11 | UFGT (90) | View species results |
| Rosmarinic acid pathway | 109 | 7 | 4CL (31) | View species results |
| Steroid pathway | 101 | 12 | CAS (49) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1221 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 318 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Sbra09G0009670.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Sbra09G0009690.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Sbra09G0009960.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Sbra10G0018740.1 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Sbra11G0000090.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Sbra11G0005310.1 | Alkaloid | NMT | low | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Sbra11G0007180.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Sbra11G0007470.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Sbra11G0008800.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Sbra12G0005250.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Sbra12G0006350.1 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| Sbra12G0007210.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Sbra13G0009160.1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Sbra13G0010140.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Sbra14G0004260.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Sbra14G0004630.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Sbra14G0007040.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Sbra15G0001610.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Sbra15G0006640.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Sbra15G0012900.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Sbra16G0003670.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Sbra16G0011680.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Sbra16G0016500.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Sbra16G0020420.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Sbra16G0020630.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Sbra16G0030080.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Sbra17G0001150.1 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Sbra17G0004340.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Sbra17G0004550.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Sbra17G0006740.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |