PlantSME Plant secondary metabolism enzyme database

Salix chaenomeloides (salix_chaenomeloides)

Imported from atlas release summary for Salix chaenomeloides.

1473
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.45% Phenylpropanoid pathway 21.18% Alkaloid pathway 20.71% Flavonoid pathway 13.03% Rosmarinic acid pathway 10.25% Steroid pathway 6.38%
Family Distribution
C4H 6.22% C3'H/CYP98A 6.22% BAHD 5.95% CYP76 4.19% 4CL 4.01% IFS 3.95% UGT 3.82% POD 3.77%
Other Families 61.87%
More Families (96)
T3O 139 3.71% 7DLGT 124 3.31% UFGT 117 3.12% F3H 101 2.7% DWF4/CYP90B1 101 2.7% NMT 85 2.27% F3'H/CYP75B 73 1.95% STR 72 1.92% BR6OX2/CYP85A2 68 1.82% CAD 57 1.52% CODM/T6ODM 55 1.47% TRI/TRII 54 1.44% H6H 53 1.42% LAC 48 1.28% SMT1/SMT2/SMT3 47 1.26% CAS 47 1.26% CYP71 41 1.09% HCT 40 1.07% IO 39 1.04% RAS 38 1.01% IFR 37 0.99% CSE 35 0.93% GS 33 0.88% PYKS 33 0.88% CYP90D1 33 0.88% TAT 32 0.85% TPS 32 0.85% CCR 31 0.83% SGD 30 0.8% GES 30 0.8% ANR 27 0.72% PMT 24 0.64% F3'5'H/CYP75A 24 0.64% COMT 24 0.64% NCS 21 0.56% T16H 20 0.53% BR6OX1/CYP85A1 20 0.53% SLS 19 0.51% FNS 19 0.51% DFR 19 0.51% CPD/CYP90A1 19 0.51% 16OMT 18 0.48% 7DLH 18 0.48% PAL 18 0.48% F5H/CYP84A 16 0.43% CYP51G1 15 0.4% G8O/G8H 14 0.37% 8HGO 14 0.37% LAMT 13 0.35% CYP719 13 0.35% ANS/LDOX 12 0.32% SQE 12 0.32% ISY 10 0.27% AACT 10 0.27% CHS 9 0.24% SQS/FDFT1 9 0.24% CNMT 8 0.21% COR 8 0.21% CYP80B1 8 0.21% MPO 8 0.21% HPPR 8 0.21% CPR 7 0.19% ROT3/CYP90C1 6 0.16% FPPS 6 0.16% GGPPS 6 0.16% HMGR 6 0.16% DXS 6 0.16% MVD 6 0.16% BBE 5 0.13% CHI 5 0.13% CCoAOMT 5 0.13% SMO1/SMO2 5 0.13% DET2 5 0.13% TDC 4 0.11% CMK/IspE 4 0.11% MVK 4 0.11% DWF5 3 0.08% IDI 3 0.08% CYP80F1 2 0.05% TYDC_DDC 2 0.05% FK 2 0.05% DWF7 2 0.05% DWF1 2 0.05% PMK 2 0.05% MCT/IspD 2 0.05% HMGS 2 0.05% MDS/IspF 2 0.05% HDS/IspG 2 0.05% DXR 2 0.05% ODC 1 0.03% ADC 1 0.03% FLS 1 0.03% HYD1 1 0.03% CPI1 1 0.03% GPPS 1 0.03% HDR/IspH 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (160) View species results
Phenylpropanoid pathway 312 11 POD (125) View species results
Alkaloid pathway 305 21 NMT (43) View species results
Flavonoid pathway 192 11 UFGT (106) View species results
Rosmarinic acid pathway 151 7 C4H (58) View species results
Steroid pathway 94 10 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1459 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
salix_chaenomeloides_GWHPBDOA000899 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA001980 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA002461 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA003939 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA007663 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA008600 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA008603 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA009628 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA009753 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA010993 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA013770 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA013805 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA014478 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA014873 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA018468 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA019801 Flavonoid FNS low borderline
salix_chaenomeloides_GWHPBDOA019804 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA022230 Flavonoid FNS medium borderline
salix_chaenomeloides_GWHPBDOA023741 Flavonoid FNS medium borderline