Salix chaenomeloides (salix_chaenomeloides)
Imported from atlas release summary for Salix chaenomeloides.
1473
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1473
Candidate Genes
C4H
6.22%
C3'H/CYP98A
6.22%
BAHD
5.95%
CYP76
4.19%
4CL
4.01%
IFS
3.95%
UGT
3.82%
POD
3.77%
Other Families
61.87%
More Families (96)
T3O
139
3.71%
7DLGT
124
3.31%
UFGT
117
3.12%
F3H
101
2.7%
DWF4/CYP90B1
101
2.7%
NMT
85
2.27%
F3'H/CYP75B
73
1.95%
STR
72
1.92%
BR6OX2/CYP85A2
68
1.82%
CAD
57
1.52%
CODM/T6ODM
55
1.47%
TRI/TRII
54
1.44%
H6H
53
1.42%
LAC
48
1.28%
SMT1/SMT2/SMT3
47
1.26%
CAS
47
1.26%
CYP71
41
1.09%
HCT
40
1.07%
IO
39
1.04%
RAS
38
1.01%
IFR
37
0.99%
CSE
35
0.93%
GS
33
0.88%
PYKS
33
0.88%
CYP90D1
33
0.88%
TAT
32
0.85%
TPS
32
0.85%
CCR
31
0.83%
SGD
30
0.8%
GES
30
0.8%
ANR
27
0.72%
PMT
24
0.64%
F3'5'H/CYP75A
24
0.64%
COMT
24
0.64%
NCS
21
0.56%
T16H
20
0.53%
BR6OX1/CYP85A1
20
0.53%
SLS
19
0.51%
FNS
19
0.51%
DFR
19
0.51%
CPD/CYP90A1
19
0.51%
16OMT
18
0.48%
7DLH
18
0.48%
PAL
18
0.48%
F5H/CYP84A
16
0.43%
CYP51G1
15
0.4%
G8O/G8H
14
0.37%
8HGO
14
0.37%
LAMT
13
0.35%
CYP719
13
0.35%
ANS/LDOX
12
0.32%
SQE
12
0.32%
ISY
10
0.27%
AACT
10
0.27%
CHS
9
0.24%
SQS/FDFT1
9
0.24%
CNMT
8
0.21%
COR
8
0.21%
CYP80B1
8
0.21%
MPO
8
0.21%
HPPR
8
0.21%
CPR
7
0.19%
ROT3/CYP90C1
6
0.16%
FPPS
6
0.16%
GGPPS
6
0.16%
HMGR
6
0.16%
DXS
6
0.16%
MVD
6
0.16%
BBE
5
0.13%
CHI
5
0.13%
CCoAOMT
5
0.13%
SMO1/SMO2
5
0.13%
DET2
5
0.13%
TDC
4
0.11%
CMK/IspE
4
0.11%
MVK
4
0.11%
DWF5
3
0.08%
IDI
3
0.08%
CYP80F1
2
0.05%
TYDC_DDC
2
0.05%
FK
2
0.05%
DWF7
2
0.05%
DWF1
2
0.05%
PMK
2
0.05%
MCT/IspD
2
0.05%
HMGS
2
0.05%
MDS/IspF
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
ODC
1
0.03%
ADC
1
0.03%
FLS
1
0.03%
HYD1
1
0.03%
CPI1
1
0.03%
GPPS
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 419 | 19 | BAHD (160) | View species results |
| Phenylpropanoid pathway | 312 | 11 | POD (125) | View species results |
| Alkaloid pathway | 305 | 21 | NMT (43) | View species results |
| Flavonoid pathway | 192 | 11 | UFGT (106) | View species results |
| Rosmarinic acid pathway | 151 | 7 | C4H (58) | View species results |
| Steroid pathway | 94 | 10 | CAS (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1459 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 301 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| salix_chaenomeloides_GWHPBDOA005510 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA007617 | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| salix_chaenomeloides_GWHPBDOA007907 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA007915 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA012107 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA012857 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA015445 | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| salix_chaenomeloides_GWHPBDOA016024 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA016025 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA016026 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA016027 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA016029 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA016030 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA016860 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA016888 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA016889 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA020922 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA020923 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| salix_chaenomeloides_GWHPBDOA022862 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA022954 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| salix_chaenomeloides_GWHPBDOA025896 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |