PlantSME Plant secondary metabolism enzyme database

Salix suchowensis (salix_suchowensis)

Imported from atlas release summary for Salix suchowensis.

1982
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.62% Alkaloid pathway 21.29% Phenylpropanoid pathway 20.23% Flavonoid pathway 13.22% Rosmarinic acid pathway 8.88% Steroid pathway 6.76%
Family Distribution
C4H 6.32% C3'H/CYP98A 6.24% BAHD 5.37% UGT 4.09% CYP76 4.07% 7DLGT 3.94% IFS 3.9% UFGT 3.78%
Other Families 62.3%
More Families (96)
POD 172 3.55% 4CL 171 3.53% T3O 165 3.41% DWF4/CYP90B1 127 2.62% F3H 122 2.52% NMT 105 2.17% F3'H/CYP75B 87 1.8% BR6OX2/CYP85A2 85 1.76% CAD 81 1.67% STR 80 1.65% H6H 70 1.45% LAC 66 1.36% CAS 66 1.36% TRI/TRII 61 1.26% CODM/T6ODM 61 1.26% SMT1/SMT2/SMT3 57 1.18% CYP71 56 1.16% HCT 53 1.09% BBE 52 1.07% IO 50 1.03% CYP90D1 45 0.93% GES 44 0.91% SGD 44 0.91% TPS 44 0.91% GS 43 0.89% IFR 43 0.89% RAS 43 0.89% F3'5'H/CYP75A 41 0.85% PYKS 38 0.78% COMT 38 0.78% TAT 38 0.78% CSE 36 0.74% SLS 34 0.7% T16H 33 0.68% CCR 32 0.66% ANR 31 0.64% G8O/G8H 28 0.58% 16OMT 28 0.58% BR6OX1/CYP85A1 28 0.58% PMT 27 0.56% 8HGO 25 0.52% CPD/CYP90A1 25 0.52% F5H/CYP84A 22 0.45% CYP51G1 22 0.45% 7DLH 21 0.43% FNS 21 0.43% SQE 21 0.43% CNMT 19 0.39% LAMT 19 0.39% CYP719 18 0.37% NCS 18 0.37% PAL 18 0.37% DFR 18 0.37% MPO 13 0.27% ISY 12 0.25% CPR 12 0.25% AACT 12 0.25% SQS/FDFT1 11 0.23% HPPR 10 0.21% CHS 9 0.19% MVD 9 0.19% HMGR 9 0.19% FPPS 9 0.19% GGPPS 9 0.19% COR 8 0.17% ANS/LDOX 8 0.17% DET2 8 0.17% TYDC_DDC 7 0.14% ROT3/CYP90C1 6 0.12% SMO1/SMO2 6 0.12% MVK 6 0.12% DXS 6 0.12% CYP80B1 5 0.1% TDC 5 0.1% CHI 5 0.1% CCoAOMT 4 0.08% MCT/IspD 4 0.08% DWF1 3 0.06% CYP80F1 2 0.04% ODC 2 0.04% DWF7 2 0.04% HYD1 2 0.04% DWF5 2 0.04% IDI 2 0.04% MDS/IspF 2 0.04% HMGS 2 0.04% DXR 2 0.04% HDS/IspG 2 0.04% HDR/IspH 2 0.04% 6OMT_4OMT_SOMT 1 0.02% ADC 1 0.02% FLS 1 0.02% CPI1 1 0.02% FK 1 0.02% CMK/IspE 1 0.02% PMK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 587 20 BAHD (206) View species results
Alkaloid pathway 422 22 7DLGT (86) View species results
Phenylpropanoid pathway 401 11 POD (164) View species results
Flavonoid pathway 262 8 UFGT (173) View species results
Rosmarinic acid pathway 176 7 C4H (60) View species results
Steroid pathway 134 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1894 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
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Gene Pathway Family Confidence Status
salix_suchowensis_KAG5220128.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5221834.1 Terpenoid AACT medium pass
salix_suchowensis_KAG5222602.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5223675.1 Terpenoid AACT low borderline
salix_suchowensis_KAG5227904.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5227905.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5232098.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5242311.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5243778.1 Terpenoid AACT low borderline
salix_suchowensis_KAG5249737.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5251984.1 Terpenoid AACT medium borderline
salix_suchowensis_KAG5252021.1 Terpenoid AACT low borderline