Salix suchowensis (salix_suchowensis)
Imported from atlas release summary for Salix suchowensis.
1982
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1982
Candidate Genes
C4H
6.32%
C3'H/CYP98A
6.24%
BAHD
5.37%
UGT
4.09%
CYP76
4.07%
7DLGT
3.94%
IFS
3.9%
UFGT
3.78%
Other Families
62.3%
More Families (96)
POD
172
3.55%
4CL
171
3.53%
T3O
165
3.41%
DWF4/CYP90B1
127
2.62%
F3H
122
2.52%
NMT
105
2.17%
F3'H/CYP75B
87
1.8%
BR6OX2/CYP85A2
85
1.76%
CAD
81
1.67%
STR
80
1.65%
H6H
70
1.45%
LAC
66
1.36%
CAS
66
1.36%
TRI/TRII
61
1.26%
CODM/T6ODM
61
1.26%
SMT1/SMT2/SMT3
57
1.18%
CYP71
56
1.16%
HCT
53
1.09%
BBE
52
1.07%
IO
50
1.03%
CYP90D1
45
0.93%
GES
44
0.91%
SGD
44
0.91%
TPS
44
0.91%
GS
43
0.89%
IFR
43
0.89%
RAS
43
0.89%
F3'5'H/CYP75A
41
0.85%
PYKS
38
0.78%
COMT
38
0.78%
TAT
38
0.78%
CSE
36
0.74%
SLS
34
0.7%
T16H
33
0.68%
CCR
32
0.66%
ANR
31
0.64%
G8O/G8H
28
0.58%
16OMT
28
0.58%
BR6OX1/CYP85A1
28
0.58%
PMT
27
0.56%
8HGO
25
0.52%
CPD/CYP90A1
25
0.52%
F5H/CYP84A
22
0.45%
CYP51G1
22
0.45%
7DLH
21
0.43%
FNS
21
0.43%
SQE
21
0.43%
CNMT
19
0.39%
LAMT
19
0.39%
CYP719
18
0.37%
NCS
18
0.37%
PAL
18
0.37%
DFR
18
0.37%
MPO
13
0.27%
ISY
12
0.25%
CPR
12
0.25%
AACT
12
0.25%
SQS/FDFT1
11
0.23%
HPPR
10
0.21%
CHS
9
0.19%
MVD
9
0.19%
HMGR
9
0.19%
FPPS
9
0.19%
GGPPS
9
0.19%
COR
8
0.17%
ANS/LDOX
8
0.17%
DET2
8
0.17%
TYDC_DDC
7
0.14%
ROT3/CYP90C1
6
0.12%
SMO1/SMO2
6
0.12%
MVK
6
0.12%
DXS
6
0.12%
CYP80B1
5
0.1%
TDC
5
0.1%
CHI
5
0.1%
CCoAOMT
4
0.08%
MCT/IspD
4
0.08%
DWF1
3
0.06%
CYP80F1
2
0.04%
ODC
2
0.04%
DWF7
2
0.04%
HYD1
2
0.04%
DWF5
2
0.04%
IDI
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
DXR
2
0.04%
HDS/IspG
2
0.04%
HDR/IspH
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
ADC
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
CMK/IspE
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 587 | 20 | BAHD (206) | View species results |
| Alkaloid pathway | 422 | 22 | 7DLGT (86) | View species results |
| Phenylpropanoid pathway | 401 | 11 | POD (164) | View species results |
| Flavonoid pathway | 262 | 8 | UFGT (173) | View species results |
| Rosmarinic acid pathway | 176 | 7 | C4H (60) | View species results |
| Steroid pathway | 134 | 13 | CAS (57) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1894 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 356 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| salix_suchowensis_KAG5219272.1 | Alkaloid | PMT | medium | pass |
| salix_suchowensis_KAG5219338.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5223914.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5223915.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5223934.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5224345.1 | Alkaloid | PMT | medium | pass |
| salix_suchowensis_KAG5224972.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5225904.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5226380.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5227819.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5228805.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5228909.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5230362.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5231614.1 | Alkaloid | PMT | medium | pass |
| salix_suchowensis_KAG5233740.1 | Alkaloid | PMT | medium | borderline |
| salix_suchowensis_KAG5236544.1 | Alkaloid | PMT | medium | pass |
| salix_suchowensis_KAG5236697.1 | Alkaloid | PMT | medium | borderline |
| salix_suchowensis_KAG5240620.1 | Alkaloid | PMT | medium | borderline |
| salix_suchowensis_KAG5244085.1 | Alkaloid | PMT | medium | pass |
| salix_suchowensis_KAG5246398.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5248513.1 | Alkaloid | PMT | medium | pass |
| salix_suchowensis_KAG5248514.1 | Alkaloid | PMT | medium | pass |
| salix_suchowensis_KAG5248898.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5249800.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5250239.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5250417.1 | Alkaloid | PMT | low | borderline |
| salix_suchowensis_KAG5254362.1 | Alkaloid | PMT | low | borderline |