Schrenkiella parvula (schrenkiella_parvula)
Imported from atlas release summary for Schrenkiella parvula.
1451
Candidate Protein Records
1197
Pathway-Level Records
2919
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2919
Family-Level Calls
BAHD
6.51%
C4H
6.34%
C3'H/CYP98A
5.96%
4CL
4.52%
POD
4.45%
CYP76
4.32%
IFS
3.8%
UGT
3.46%
Other Families
60.64%
More Families (96)
UFGT
97
3.32%
7DLGT
95
3.25%
T3O
94
3.22%
NMT
81
2.77%
DWF4/CYP90B1
79
2.71%
F3H
76
2.6%
BR6OX2/CYP85A2
59
2.02%
STR
53
1.82%
SMT1/SMT2/SMT3
53
1.82%
F3'H/CYP75B
52
1.78%
CODM/T6ODM
47
1.61%
CYP71
47
1.61%
H6H
39
1.34%
SGD
38
1.3%
TRI/TRII
35
1.2%
CSE
33
1.13%
T16H
32
1.1%
IFR
32
1.1%
PYKS
28
0.96%
CAD
28
0.96%
RAS
25
0.86%
BBE
23
0.79%
LAC
23
0.79%
COMT
23
0.79%
CAS
23
0.79%
G8O/G8H
22
0.75%
F3'5'H/CYP75A
21
0.72%
F5H/CYP84A
21
0.72%
TAT
21
0.72%
GS
20
0.69%
FNS
20
0.69%
ANR
19
0.65%
IO
18
0.62%
SLS
18
0.62%
CCR
18
0.62%
LAMT
16
0.55%
HCT
15
0.51%
8HGO
14
0.48%
GES
14
0.48%
CYP90D1
14
0.48%
TPS
14
0.48%
16OMT
13
0.45%
7DLH
13
0.45%
ANS/LDOX
11
0.38%
ROT3/CYP90C1
11
0.38%
CPD/CYP90A1
11
0.38%
BR6OX1/CYP85A1
11
0.38%
GGPPS
10
0.34%
FPPS
10
0.34%
COR
9
0.31%
PMT
9
0.31%
PAL
9
0.31%
NCS
8
0.27%
CYP719
8
0.27%
CPR
8
0.27%
CNMT
7
0.24%
CCoAOMT
7
0.24%
SQE
7
0.24%
AACT
7
0.24%
MPO
6
0.21%
DFR
6
0.21%
CYP51G1
6
0.21%
CHS
5
0.17%
SMO1/SMO2
5
0.17%
SQS/FDFT1
5
0.17%
DET2
5
0.17%
MVD
5
0.17%
XMT_MXMT_DXMT
4
0.14%
CYP80F1
3
0.1%
CYP80B1
3
0.1%
CHI
3
0.1%
HPPR
3
0.1%
DWF1
3
0.1%
DWF7
3
0.1%
MVK
3
0.1%
DXS
3
0.1%
TDC
2
0.07%
ADC
2
0.07%
TYDC_DDC
2
0.07%
ISY
2
0.07%
FLS
2
0.07%
CPI1
2
0.07%
MCT/IspD
2
0.07%
IDI
2
0.07%
CMK/IspE
2
0.07%
HMGR
2
0.07%
ODC
1
0.03%
HYD1
1
0.03%
DWF5
1
0.03%
FK
1
0.03%
PMK
1
0.03%
MDS/IspF
1
0.03%
DXR
1
0.03%
HMGS
1
0.03%
HDS/IspG
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 355 | 19 | BAHD (155) | View species results |
| Phenylpropanoid pathway | 266 | 12 | POD (125) | View species results |
| Alkaloid pathway | 250 | 20 | 7DLGT (41) | View species results |
| Flavonoid pathway | 141 | 7 | UFGT (90) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (40) | View species results |
| Steroid pathway | 78 | 11 | SMT1/SMT2/SMT3 (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1139 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 230 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| schrenkiella_parvula_Sp7g34040.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g34980.1 | Rosmarinic Acid | C4H | medium | pass |
| schrenkiella_parvula_Sp7g34990.1 | Rosmarinic Acid | C4H | medium | pass |
| schrenkiella_parvula_Sp7g35000.1 | Rosmarinic Acid | C4H | medium | pass |
| schrenkiella_parvula_Sp7g35010.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g35020.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g35030.1 | Rosmarinic Acid | C4H | medium | pass |
| schrenkiella_parvula_Sp7g35060.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g35070.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g35090.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g35940.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g36370.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_Sp7g36820.1 | Rosmarinic Acid | C4H | medium | pass |
| schrenkiella_parvula_SpUn0020_0090.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0024_0130.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0028_0060.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0236_0010.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0236_0020.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0311_0010.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0440_0010.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0536_0010.1 | Rosmarinic Acid | C4H | medium | pass |
| schrenkiella_parvula_SpUn0536_0020.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0541_0010.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn0852_0010.1 | Rosmarinic Acid | C4H | low | borderline |
| schrenkiella_parvula_SpUn1007_0010.1 | Rosmarinic Acid | C4H | low | borderline |