Schrenkiella parvula (schrenkiella_parvula)
Imported from atlas release summary for Schrenkiella parvula.
1197
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1197
Candidate Genes
BAHD
6.51%
C4H
6.34%
C3'H/CYP98A
5.96%
4CL
4.52%
POD
4.45%
CYP76
4.32%
IFS
3.8%
UGT
3.46%
Other Families
60.64%
More Families (96)
UFGT
97
3.32%
7DLGT
95
3.25%
T3O
94
3.22%
NMT
81
2.77%
DWF4/CYP90B1
79
2.71%
F3H
76
2.6%
BR6OX2/CYP85A2
59
2.02%
STR
53
1.82%
SMT1/SMT2/SMT3
53
1.82%
F3'H/CYP75B
52
1.78%
CODM/T6ODM
47
1.61%
CYP71
47
1.61%
H6H
39
1.34%
SGD
38
1.3%
TRI/TRII
35
1.2%
CSE
33
1.13%
T16H
32
1.1%
IFR
32
1.1%
PYKS
28
0.96%
CAD
28
0.96%
RAS
25
0.86%
BBE
23
0.79%
LAC
23
0.79%
COMT
23
0.79%
CAS
23
0.79%
G8O/G8H
22
0.75%
F3'5'H/CYP75A
21
0.72%
F5H/CYP84A
21
0.72%
TAT
21
0.72%
GS
20
0.69%
FNS
20
0.69%
ANR
19
0.65%
IO
18
0.62%
SLS
18
0.62%
CCR
18
0.62%
LAMT
16
0.55%
HCT
15
0.51%
8HGO
14
0.48%
GES
14
0.48%
CYP90D1
14
0.48%
TPS
14
0.48%
16OMT
13
0.45%
7DLH
13
0.45%
ANS/LDOX
11
0.38%
ROT3/CYP90C1
11
0.38%
CPD/CYP90A1
11
0.38%
BR6OX1/CYP85A1
11
0.38%
GGPPS
10
0.34%
FPPS
10
0.34%
COR
9
0.31%
PMT
9
0.31%
PAL
9
0.31%
NCS
8
0.27%
CYP719
8
0.27%
CPR
8
0.27%
CNMT
7
0.24%
CCoAOMT
7
0.24%
SQE
7
0.24%
AACT
7
0.24%
MPO
6
0.21%
DFR
6
0.21%
CYP51G1
6
0.21%
CHS
5
0.17%
SMO1/SMO2
5
0.17%
SQS/FDFT1
5
0.17%
DET2
5
0.17%
MVD
5
0.17%
XMT_MXMT_DXMT
4
0.14%
CYP80F1
3
0.1%
CYP80B1
3
0.1%
CHI
3
0.1%
HPPR
3
0.1%
DWF1
3
0.1%
DWF7
3
0.1%
MVK
3
0.1%
DXS
3
0.1%
TDC
2
0.07%
ADC
2
0.07%
TYDC_DDC
2
0.07%
ISY
2
0.07%
FLS
2
0.07%
CPI1
2
0.07%
MCT/IspD
2
0.07%
IDI
2
0.07%
CMK/IspE
2
0.07%
HMGR
2
0.07%
ODC
1
0.03%
HYD1
1
0.03%
DWF5
1
0.03%
FK
1
0.03%
PMK
1
0.03%
MDS/IspF
1
0.03%
DXR
1
0.03%
HMGS
1
0.03%
HDS/IspG
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 355 | 19 | BAHD (155) | View species results |
| Phenylpropanoid pathway | 266 | 12 | POD (125) | View species results |
| Alkaloid pathway | 250 | 20 | 7DLGT (41) | View species results |
| Flavonoid pathway | 141 | 7 | UFGT (90) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (40) | View species results |
| Steroid pathway | 78 | 11 | SMT1/SMT2/SMT3 (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1139 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 230 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| schrenkiella_parvula_Sp1g01150.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp1g03040.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp1g06480.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp1g17330.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp1g22760.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp1g31080.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp2g02000.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp2g08570.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp2g18980.1 | Alkaloid | PYKS | high | pass |
| schrenkiella_parvula_Sp2g19000.1 | Alkaloid | PYKS | high | pass |
| schrenkiella_parvula_Sp2g19440.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp3g28440.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp3g29500.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp3g29550.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp4g06450.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp4g11490.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp4g28760.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp5g10110.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp5g23600.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp5g26330.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp6g00100.1 | Alkaloid | PYKS | high | pass |
| schrenkiella_parvula_Sp6g30070.1 | Alkaloid | PYKS | high | pass |
| schrenkiella_parvula_Sp6g37900.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp7g32030.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp7g32300.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp7g32310.1 | Alkaloid | PYKS | low | borderline |
| schrenkiella_parvula_Sp7g32620.1 | Alkaloid | PYKS | high | pass |
| schrenkiella_parvula_SpUn0377_0010.1 | Alkaloid | PYKS | low | borderline |