Solanum rostratum (solanum_rostratum)
Imported from atlas release summary for Solanum rostratum.
1983
Candidate Protein Records
1685
Pathway-Level Records
4381
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4381
Family-Level Calls
C4H
6.89%
C3'H/CYP98A
6.16%
BAHD
5.34%
UGT
5.02%
7DLGT
4.7%
UFGT
4.59%
T3O
4.02%
4CL
3.93%
Other Families
59.35%
More Families (97)
POD
167
3.81%
CYP76
165
3.77%
IFS
143
3.26%
F3H
121
2.76%
F3'H/CYP75B
114
2.6%
DWF4/CYP90B1
107
2.44%
BR6OX2/CYP85A2
90
2.05%
NMT
87
1.99%
STR
77
1.76%
CYP71
73
1.67%
H6H
70
1.6%
CODM/T6ODM
65
1.48%
TAT
53
1.21%
SMT1/SMT2/SMT3
52
1.19%
TRI/TRII
51
1.16%
CAD
48
1.1%
LAC
43
0.98%
GES
41
0.94%
TPS
41
0.94%
CSE
39
0.89%
CYP90D1
36
0.82%
IFR
35
0.8%
T16H
33
0.75%
G8O/G8H
32
0.73%
BBE
32
0.73%
HCT
32
0.73%
CAS
32
0.73%
7DLH
30
0.68%
GS
30
0.68%
F3'5'H/CYP75A
28
0.64%
F5H/CYP84A
28
0.64%
PYKS
27
0.62%
CYP51G1
27
0.62%
FNS
25
0.57%
COMT
25
0.57%
SLS
24
0.55%
PAL
24
0.55%
PMT
23
0.52%
IO
22
0.5%
RAS
20
0.46%
SGD
19
0.43%
BR6OX1/CYP85A1
18
0.41%
16OMT
17
0.39%
ANR
17
0.39%
CCR
17
0.39%
LAMT
16
0.37%
CPD/CYP90A1
15
0.34%
NCS
13
0.3%
TYDC_DDC
12
0.27%
ANS/LDOX
12
0.27%
DFR
12
0.27%
8HGO
11
0.25%
CNMT
11
0.25%
AACT
11
0.25%
FPPS
11
0.25%
COR
10
0.23%
CCoAOMT
10
0.23%
SQS/FDFT1
10
0.23%
ROT3/CYP90C1
9
0.21%
CHS
8
0.18%
HPPR
8
0.18%
GGPPS
8
0.18%
MPO
7
0.16%
CPR
7
0.16%
CYP719
6
0.14%
6OMT_4OMT_SOMT
5
0.11%
ODC
5
0.11%
ISY
5
0.11%
CHI
5
0.11%
DET2
5
0.11%
SQE
5
0.11%
MVD
5
0.11%
HMGS
5
0.11%
FLS
4
0.09%
SMO1/SMO2
4
0.09%
HMGR
4
0.09%
CYP80B1
3
0.07%
CYP80F1
3
0.07%
DWF5
3
0.07%
DWF1
3
0.07%
MVK
3
0.07%
IDI
3
0.07%
PMK
3
0.07%
ADC
2
0.05%
FK
2
0.05%
HYD1
2
0.05%
DXS
2
0.05%
CMK/IspE
2
0.05%
MCT/IspD
2
0.05%
XMT_MXMT_DXMT
1
0.02%
TDC
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
HDR/IspH
1
0.02%
DXR
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 502 | 19 | UGT (197) | View species results |
| Alkaloid pathway | 355 | 23 | 7DLGT (77) | View species results |
| Phenylpropanoid pathway | 320 | 11 | POD (140) | View species results |
| Flavonoid pathway | 258 | 12 | UFGT (185) | View species results |
| Rosmarinic acid pathway | 177 | 7 | C4H (83) | View species results |
| Steroid pathway | 73 | 12 | SMT1/SMT2/SMT3 (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1754 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 286 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| solanum_rostratum_evm.model.Chr3.1805 | Alkaloid | BBE | medium | borderline |
| solanum_rostratum_evm.model.Chr4.789 | Alkaloid | BBE | medium | borderline |
| solanum_rostratum_evm.model.Chr5.250 | Alkaloid | BBE | medium | borderline |
| solanum_rostratum_evm.model.Chr10.2479 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr11.1421 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr11.1751 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr12.1753 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr12.914 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr4.291 | Alkaloid | CNMT | medium | pass |
| solanum_rostratum_evm.model.Chr6.1924 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr8.1212 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr8.1434 | Alkaloid | CNMT | medium | borderline |
| solanum_rostratum_evm.model.Chr9.1562 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr9.517 | Alkaloid | CNMT | low | borderline |
| solanum_rostratum_evm.model.Chr1.1576 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr1.2131 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr1.2132 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr1.2314 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr1.2382 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr1.3330 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr1.3593 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr1.3596 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr10.2645 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr10.511 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr10.695 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr11.1500 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr11.1515 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr11.1516 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr11.276 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1227 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1716 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1717 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1718 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1719 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1720 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1721 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1722 | Alkaloid | CODM/T6ODM | medium | pass |
| solanum_rostratum_evm.model.Chr12.1723 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.1814 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr12.548 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr2.2404 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr2.346 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr2.45 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr2.58 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr3.2020 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr3.2064 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr3.2429 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr3.2783 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr3.2942 | Alkaloid | CODM/T6ODM | medium | borderline |
| solanum_rostratum_evm.model.Chr3.740 | Alkaloid | CODM/T6ODM | medium | borderline |