Solanum sitiens (solanum_sitiens)
/
Imported from atlas release summary for Solanum sitiens.
1408
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1408
Candidate Genes
C4H
6.86%
C3'H/CYP98A
5.9%
BAHD
5.05%
UGT
4.14%
POD
4.02%
CYP76
3.83%
4CL
3.81%
7DLGT
3.64%
Other Families
62.75%
More Families (97)
T3O
141
3.31%
IFS
141
3.31%
UFGT
135
3.17%
F3H
125
2.94%
F3'H/CYP75B
119
2.8%
DWF4/CYP90B1
115
2.7%
BR6OX2/CYP85A2
99
2.33%
NMT
93
2.19%
CYP71
85
2.0%
CODM/T6ODM
75
1.76%
STR
71
1.67%
H6H
70
1.65%
TPS
54
1.27%
TRI/TRII
53
1.25%
CAD
53
1.25%
SMT1/SMT2/SMT3
53
1.25%
GES
51
1.2%
TAT
51
1.2%
F5H/CYP84A
49
1.15%
PAL
45
1.06%
LAC
43
1.01%
G8O/G8H
39
0.92%
CSE
38
0.89%
IO
37
0.87%
T16H
36
0.85%
CAS
35
0.82%
GS
34
0.8%
7DLH
34
0.8%
PYKS
33
0.78%
F3'5'H/CYP75A
31
0.73%
IFR
30
0.71%
SLS
28
0.66%
COMT
26
0.61%
ANS/LDOX
25
0.59%
PMT
24
0.56%
HCT
24
0.56%
CYP90D1
24
0.56%
BR6OX1/CYP85A1
21
0.49%
FNS
20
0.47%
CCR
20
0.47%
16OMT
19
0.45%
BBE
19
0.45%
ANR
18
0.42%
CPD/CYP90A1
18
0.42%
NCS
17
0.4%
CYP51G1
17
0.4%
8HGO
15
0.35%
SGD
15
0.35%
RAS
15
0.35%
CNMT
13
0.31%
LAMT
12
0.28%
DFR
12
0.28%
CCoAOMT
12
0.28%
ROT3/CYP90C1
12
0.28%
COR
11
0.26%
CHS
11
0.26%
FPPS
11
0.26%
MPO
9
0.21%
SQS/FDFT1
9
0.21%
GGPPS
9
0.21%
TYDC_DDC
8
0.19%
CPR
7
0.16%
ISY
6
0.14%
HPPR
6
0.14%
AACT
6
0.14%
CYP719
5
0.12%
TDC
5
0.12%
HMGR
5
0.12%
MVD
5
0.12%
CYP80B1
4
0.09%
CHI
4
0.09%
DET2
4
0.09%
SMO1/SMO2
4
0.09%
DXS
4
0.09%
ODC
3
0.07%
FLS
3
0.07%
SQE
3
0.07%
DWF7
3
0.07%
MVK
3
0.07%
HMGS
3
0.07%
6OMT_4OMT_SOMT
2
0.05%
ADC
2
0.05%
XMT_MXMT_DXMT
2
0.05%
DWF1
2
0.05%
DWF5
2
0.05%
HYD1
2
0.05%
PMK
2
0.05%
IDI
2
0.05%
CYP80F1
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
HDS/IspG
1
0.02%
CMK/IspE
1
0.02%
MCT/IspD
1
0.02%
DXR
1
0.02%
MDS/IspF
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 382 | 19 | BAHD (130) | View species results |
| Alkaloid pathway | 321 | 22 | 7DLGT (57) | View species results |
| Phenylpropanoid pathway | 310 | 11 | POD (137) | View species results |
| Flavonoid pathway | 183 | 10 | UFGT (102) | View species results |
| Rosmarinic acid pathway | 144 | 7 | C4H (57) | View species results |
| Steroid pathway | 68 | 13 | CAS (22) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1762 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 254 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| solanum_sitiens_g25126.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g25193.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| solanum_sitiens_g25501.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| solanum_sitiens_g25629.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g26165.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| solanum_sitiens_g2648.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| solanum_sitiens_g2665.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| solanum_sitiens_g26846.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g26847.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g26849.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g27975.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| solanum_sitiens_g28089.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g28119.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g28954.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| solanum_sitiens_g29572.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| solanum_sitiens_g31163.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g3336.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g3371.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| solanum_sitiens_g3913.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| solanum_sitiens_g3925.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g3926.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| solanum_sitiens_g3927.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g4242.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| solanum_sitiens_g4243.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| solanum_sitiens_g4244.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| solanum_sitiens_g4281.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| solanum_sitiens_g4285.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g4286.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g4563.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| solanum_sitiens_g487.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g5048.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g5049.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g5136.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g5196.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| solanum_sitiens_g5394.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g5395.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g5396.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g5470.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g5772.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| solanum_sitiens_g5854.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| solanum_sitiens_g5856.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| solanum_sitiens_g5857.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT |
| solanum_sitiens_g5858.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| solanum_sitiens_g5860.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| solanum_sitiens_g6610.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| solanum_sitiens_g6611.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| solanum_sitiens_g6810.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g6811.t1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| solanum_sitiens_g6905.t1 | Terpenoid | CYP76 | medium | borderline | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| solanum_sitiens_g6911.t1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |